Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 AC018529.2-202ENST00000611482 3087 ntBASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 MIR1233-2-201ENST00000408138 82 ntBASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 MIR1233-1-201ENST00000408722 82 ntBASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 FAM8A3P-201ENST00000427218 844 ntBASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 KLF2P3-201ENST00000451977 1087 ntBASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 AC069120.2-201ENST00000524091 540 ntBASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 AC011467.4-201ENST00000594891 528 ntBASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 AL691403.2-201ENST00000618460 490 ntBASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 AC005089.1-201ENST00000619486 2241 ntBASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.73□□□□□ -0.05
CLHC1Q8NHS4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 AC093028.1-201ENST00000622998 982 ntBASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
CLHC1Q8NHS4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLHC1Q8NHS4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.71□□□□□ -0.05
CLHC1Q8NHS4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLHC1Q8NHS4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLHC1Q8NHS4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLHC1Q8NHS4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLHC1Q8NHS4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms