Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 EMBP1-201ENST00000458200 901 ntBASIC13.28□□□□□ -0.28
BEST4Q8NFU0 UNC93B7-201ENST00000509439 705 ntBASIC13.28□□□□□ -0.28
BEST4Q8NFU0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 AC073389.1-201ENST00000595595 795 ntBASIC13.28□□□□□ -0.28
BEST4Q8NFU0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BEST4Q8NFU0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.28
BEST4Q8NFU0 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 RPS8P6-201ENST00000426177 609 ntBASIC13.27□□□□□ -0.29
BEST4Q8NFU0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 AC131212.3-201ENST00000624087 4219 ntBASIC13.27□□□□□ -0.29
BEST4Q8NFU0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 AC025580.3-201ENST00000617932 1424 ntBASIC13.27□□□□□ -0.29
BEST4Q8NFU0 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.27□□□□□ -0.29
BEST4Q8NFU0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.27□□□□□ -0.29
BEST4Q8NFU0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.26□□□□□ -0.29
BEST4Q8NFU0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
BEST4Q8NFU0 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
BEST4Q8NFU0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms