Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 AL662799.1-202ENST00000614205 422 ntBASIC14.32□□□□□ -0.12
NUP43Q8NFH3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 AL365209.1-201ENST00000624418 6473 ntBASIC14.32□□□□□ -0.12
NUP43Q8NFH3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP43Q8NFH3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 AL138799.1-201ENST00000448213 1675 ntBASIC14.31□□□□□ -0.12
NUP43Q8NFH3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 AC104596.2-201ENST00000512793 793 ntBASIC14.31□□□□□ -0.12
NUP43Q8NFH3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 AJ011932.1-201ENST00000621707 465 ntBASIC14.31□□□□□ -0.12
NUP43Q8NFH3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 AC007686.3-201ENST00000619017 3487 ntBASIC14.31□□□□□ -0.12
NUP43Q8NFH3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 SLC7A15P-201ENST00000424028 1363 ntBASIC14.31□□□□□ -0.12
NUP43Q8NFH3 LILRP1-201ENST00000444199 1370 ntBASIC14.31□□□□□ -0.12
NUP43Q8NFH3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.31□□□□□ -0.12
NUP43Q8NFH3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 AC007326.2-201ENST00000624224 7579 ntBASIC14.3□□□□□ -0.12
NUP43Q8NFH3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NUP43Q8NFH3 SPTLC1P1-201ENST00000447199 261 ntBASIC14.3□□□□□ -0.12
NUP43Q8NFH3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms