Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SIMC1Q8NDZ2 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.46□□□□□ -0.1
SIMC1Q8NDZ2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
SIMC1Q8NDZ2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
SIMC1Q8NDZ2 SLC7A15P-201ENST00000424028 1363 ntBASIC14.46□□□□□ -0.1
SIMC1Q8NDZ2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SIMC1Q8NDZ2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.46□□□□□ -0.1
SIMC1Q8NDZ2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 AGAP7P-201ENST00000582299 2062 ntBASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 AGAP14-201ENST00000624701 2060 ntBASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 FAM86LP-201ENST00000478302 853 ntBASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 AC005225.4-201ENST00000557330 545 ntBASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 AL662799.1-202ENST00000614205 422 ntBASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.45□□□□□ -0.1
SIMC1Q8NDZ2 AC079781.5-202ENST00000641784 3743 ntBASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 LINC01101-201ENST00000622953 1884 ntBASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 API5-211ENST00000534695 560 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms