Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 AL512430.1-201ENST00000392575 860 ntBASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 AL627231.1-201ENST00000394467 1125 ntBASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 SERF2-206ENST00000409291 807 ntTSL 3 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 AC012362.1-201ENST00000434906 739 ntBASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC23.25■■□□□ 1.31
CFAP43Q8NDM7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 AL645933.1-201ENST00000440087 609 ntBASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 NSD1-211ENST00000511258 809 ntTSL 3 BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP43Q8NDM7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 AC244394.1-201ENST00000435000 1665 ntBASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 AP003680.1-201ENST00000598970 3660 ntBASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 DUX4L46-201ENST00000566845 751 ntBASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 PRAL-201ENST00000624952 3286 ntBASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 AC138035.3-201ENST00000622706 2791 ntBASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP43Q8NDM7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 AC026410.1-201ENST00000507366 1101 ntBASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 AC005962.1-201ENST00000584100 773 ntBASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 AL132780.4-201ENST00000624870 1135 ntBASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 AC239868.1-201ENST00000369385 493 ntBASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 HPGD-203ENST00000422112 805 ntTSL 2 BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 AC103810.10-201ENST00000606504 343 ntBASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 AC073911.3-201ENST00000624401 631 ntBASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP43Q8NDM7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 ACE3P-201ENST00000423435 1973 ntBASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 AC018463.1-201ENST00000456674 917 ntBASIC23.21■■□□□ 1.31
CFAP43Q8NDM7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms