Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.8□□□□□ -0.36
COMMD1Q8N668 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 AC107918.4-201ENST00000641966 3141 ntBASIC12.79□□□□□ -0.36
COMMD1Q8N668 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 AC027601.5-201ENST00000624065 2482 ntBASIC12.79□□□□□ -0.36
COMMD1Q8N668 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 U82695.1-201ENST00000635752 1889 ntBASIC12.79□□□□□ -0.36
COMMD1Q8N668 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 BASP1P1-201ENST00000430708 665 ntBASIC12.79□□□□□ -0.36
COMMD1Q8N668 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 RNA5SP410-201ENST00000516285 106 ntBASIC12.79□□□□□ -0.36
COMMD1Q8N668 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.79□□□□□ -0.36
COMMD1Q8N668 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COMMD1Q8N668 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 AL928921.2-201ENST00000641325 2442 ntBASIC12.78□□□□□ -0.36
COMMD1Q8N668 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms