Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 AC026434.2-201ENST00000506094 1078 ntBASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 LINC00528-201ENST00000600723 2160 ntBASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C9orf40Q8IXQ3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 FAM197Y7-201ENST00000432892 766 ntBASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 AC022210.1-201ENST00000449856 793 ntBASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 CTBP2P5-201ENST00000454986 1264 ntBASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 AL590640.2-201ENST00000457038 527 ntBASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 RN7SL48P-201ENST00000579283 293 ntBASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 ECM1P1-201ENST00000604092 1279 ntBASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 AC017083.2-201ENST00000608069 979 ntBASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 MIR6775-201ENST00000617557 69 ntBASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C9orf40Q8IXQ3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.03□□□□□ -0.16
C9orf40Q8IXQ3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms