Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 AC067750.1-201ENST00000608826 6545 ntBASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 LINC00552-201ENST00000625151 2579 ntBASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKL3Q8IVW4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 AC093214.1-201ENST00000511688 1107 ntBASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 DOC2GP-202ENST00000514950 1163 ntBASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 TPRX2P-201ENST00000535362 881 ntBASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 AL049840.4-201ENST00000602422 811 ntBASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 AL390955.2-201ENST00000603032 514 ntBASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 AC107373.2-201ENST00000607735 490 ntBASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL3Q8IVW4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.71■□□□□ 0.1
CDKL3Q8IVW4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDKL3Q8IVW4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CDKL3Q8IVW4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 DRD5P1-201ENST00000456605 1438 ntBASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms