Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MIR3147-201ENST00000577811 66 ntBASIC16.47■□□□□ 0.23
HERC6Q8IVU3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HERC6Q8IVU3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 AL136309.1-201ENST00000403917 691 ntBASIC16.46■□□□□ 0.23
HERC6Q8IVU3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 AC022616.1-201ENST00000518688 554 ntBASIC16.46■□□□□ 0.23
HERC6Q8IVU3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 RN7SL163P-201ENST00000583100 276 ntBASIC16.46■□□□□ 0.23
HERC6Q8IVU3 MIR4750-201ENST00000584564 56 ntBASIC16.46■□□□□ 0.23
HERC6Q8IVU3 RN7SL555P-201ENST00000584742 339 ntBASIC16.46■□□□□ 0.23
HERC6Q8IVU3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 AC004923.1-202ENST00000642106 209 ntBASIC16.46■□□□□ 0.23
HERC6Q8IVU3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.46■□□□□ 0.23
HERC6Q8IVU3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.46■□□□□ 0.22
HERC6Q8IVU3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HERC6Q8IVU3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HERC6Q8IVU3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
HERC6Q8IVU3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
HERC6Q8IVU3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
HERC6Q8IVU3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
HERC6Q8IVU3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.45■□□□□ 0.22
HERC6Q8IVU3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 AC104073.2-201ENST00000453737 312 ntBASIC16.45■□□□□ 0.22
HERC6Q8IVU3 AC104784.1-201ENST00000473096 294 ntBASIC16.45■□□□□ 0.22
HERC6Q8IVU3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HERC6Q8IVU3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms