Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 SLC25A39P2-201ENST00000537614 270 ntBASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 AP000842.3-202ENST00000569238 1080 ntBASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 AC011467.4-201ENST00000594891 528 ntBASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CRLF3Q8IUI8 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 AL607033.1-201ENST00000623900 1599 ntBASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 AP001059.3-201ENST00000619053 235 ntBASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 AC084121.4-201ENST00000641598 221 ntBASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 AF228730.8-201ENST00000642140 221 ntBASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 AC027601.5-201ENST00000624065 2482 ntBASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.34■□□□□ 0.05
CRLF3Q8IUI8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms