Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 AC018529.1-201ENST00000613063 361 ntBASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 FAM197Y3-203ENST00000618346 717 ntBASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 AC010327.5-201ENST00000586923 3061 ntBASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 LILRP1-201ENST00000444199 1370 ntBASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRTM1Q86UE6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 CICP20-201ENST00000443330 2801 ntBASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 AC023274.1-201ENST00000418278 595 ntBASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 ALG1L8P-201ENST00000533887 760 ntBASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRTM1Q86UE6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 YBX2P1-201ENST00000394192 760 ntBASIC13.29□□□□□ -0.28
LRRTM1Q86UE6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms