Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 RN7SKP109-201ENST00000410592 316 ntBASIC12.97□□□□□ -0.33
LRRK2Q5S007 KRT18P36-201ENST00000411618 1276 ntBASIC12.97□□□□□ -0.33
LRRK2Q5S007 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 AC114947.1-202ENST00000514136 344 ntBASIC12.97□□□□□ -0.33
LRRK2Q5S007 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 AC133540.1-201ENST00000620845 1019 ntBASIC12.97□□□□□ -0.33
LRRK2Q5S007 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRK2Q5S007 AL359258.3-201ENST00000622910 2331 ntBASIC12.97□□□□□ -0.33
LRRK2Q5S007 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 AC084364.1-201ENST00000551967 1556 ntBASIC12.97□□□□□ -0.33
LRRK2Q5S007 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRK2Q5S007 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRK2Q5S007 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 IGKV1OR-2-201ENST00000457995 350 ntBASIC12.97□□□□□ -0.33
LRRK2Q5S007 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRK2Q5S007 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
LRRK2Q5S007 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRK2Q5S007 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRK2Q5S007 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 ALOX12P2-203ENST00000570921 1945 ntBASIC12.96□□□□□ -0.33
LRRK2Q5S007 REXO1L2P-201ENST00000425429 2069 ntBASIC12.96□□□□□ -0.33
LRRK2Q5S007 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 PHF23-213ENST00000613632 850 ntTSL 5 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 AC018629.1-201ENST00000623381 1736 ntBASIC12.96□□□□□ -0.33
LRRK2Q5S007 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC12.96□□□□□ -0.33
LRRK2Q5S007 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRK2Q5S007 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRK2Q5S007 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRK2Q5S007 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRK2Q5S007 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRK2Q5S007 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRK2Q5S007 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LRRK2Q5S007 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRK2Q5S007 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC12.96□□□□□ -0.34
LRRK2Q5S007 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.96□□□□□ -0.34
LRRK2Q5S007 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.96□□□□□ -0.34
LRRK2Q5S007 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.96□□□□□ -0.34
LRRK2Q5S007 SRP14-204ENST00000558720 780 ntTSL 2 BASIC12.96□□□□□ -0.34
LRRK2Q5S007 AC084262.1-201ENST00000567818 751 ntBASIC12.96□□□□□ -0.34
LRRK2Q5S007 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.34
LRRK2Q5S007 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.96□□□□□ -0.34
LRRK2Q5S007 AC002044.2-201ENST00000624910 970 ntBASIC12.96□□□□□ -0.34
LRRK2Q5S007 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRK2Q5S007 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRK2Q5S007 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LRRK2Q5S007 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
LRRK2Q5S007 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.96□□□□□ -0.34
LRRK2Q5S007 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRK2Q5S007 AC006449.6-201ENST00000612330 2296 ntBASIC12.96□□□□□ -0.34
LRRK2Q5S007 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRK2Q5S007 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms