Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 AC092580.3-201ENST00000430932 139 ntBASIC14.72□□□□□ -0.05
RFTN2Q52LD8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 AC004449.1-201ENST00000564240 433 ntBASIC14.72□□□□□ -0.05
RFTN2Q52LD8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 AC140878.1-201ENST00000565277 250 ntBASIC14.72□□□□□ -0.05
RFTN2Q52LD8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 AC015911.4-201ENST00000588022 1070 ntBASIC14.72□□□□□ -0.05
RFTN2Q52LD8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 AC007787.1-201ENST00000588095 1583 ntBASIC14.72□□□□□ -0.05
RFTN2Q52LD8 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RFTN2Q52LD8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 AC107890.1-201ENST00000422478 521 ntBASIC14.71□□□□□ -0.05
RFTN2Q52LD8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 AC097493.3-201ENST00000509725 367 ntBASIC14.71□□□□□ -0.05
RFTN2Q52LD8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 ZNF890P-202ENST00000530367 1156 ntBASIC14.71□□□□□ -0.05
RFTN2Q52LD8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 AC004461.2-201ENST00000629517 803 ntBASIC14.71□□□□□ -0.05
RFTN2Q52LD8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFTN2Q52LD8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
RFTN2Q52LD8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RFTN2Q52LD8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RFTN2Q52LD8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms