Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 NUS1P3-201ENST00000423502 862 ntBASIC13.36□□□□□ -0.27
HIST1H3AP68431 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 AL442647.2-201ENST00000429864 857 ntBASIC13.36□□□□□ -0.27
HIST1H3AP68431 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 SERBP1P5-201ENST00000510079 1181 ntBASIC13.36□□□□□ -0.27
HIST1H3AP68431 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 AC120045.2-201ENST00000567334 178 ntBASIC13.36□□□□□ -0.27
HIST1H3AP68431 AC093726.1-201ENST00000608064 963 ntBASIC13.36□□□□□ -0.27
HIST1H3AP68431 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H3AP68431 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H3AP68431 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 AC134915.1-201ENST00000426461 574 ntBASIC13.35□□□□□ -0.27
HIST1H3AP68431 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 FAM207CP-201ENST00000443486 507 ntBASIC13.35□□□□□ -0.27
HIST1H3AP68431 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 INTS4P2-202ENST00000614726 2019 ntBASIC13.35□□□□□ -0.27
HIST1H3AP68431 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H3AP68431 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H3AP68431 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 CICP14-201ENST00000629111 2732 ntBASIC13.34□□□□□ -0.27
HIST1H3AP68431 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms