Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.03□□□□□ -0.16
CDC42P60953 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CDC42P60953 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC42P60953 AL355306.1-201ENST00000415580 579 ntBASIC14.03□□□□□ -0.16
CDC42P60953 TPM4P1-201ENST00000436100 807 ntBASIC14.03□□□□□ -0.16
CDC42P60953 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC42P60953 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.03□□□□□ -0.16
CDC42P60953 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.03□□□□□ -0.16
CDC42P60953 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC42P60953 AP000842.3-202ENST00000569238 1080 ntBASIC14.03□□□□□ -0.16
CDC42P60953 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.03□□□□□ -0.16
CDC42P60953 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.03□□□□□ -0.16
CDC42P60953 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC42P60953 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC42P60953 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDC42P60953 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDC42P60953 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDC42P60953 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC42P60953 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDC42P60953 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42P60953 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42P60953 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42P60953 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CDC42P60953 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42P60953 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42P60953 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42P60953 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42P60953 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CDC42P60953 REXO1L4P-201ENST00000605109 1937 ntBASIC14.02□□□□□ -0.16
CDC42P60953 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CDC42P60953 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.02□□□□□ -0.16
CDC42P60953 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.02□□□□□ -0.16
CDC42P60953 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.02□□□□□ -0.16
CDC42P60953 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42P60953 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42P60953 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
CDC42P60953 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
CDC42P60953 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.02□□□□□ -0.16
CDC42P60953 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CDC42P60953 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
CDC42P60953 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 MIR346-201ENST00000362234 95 ntBASIC14.02□□□□□ -0.17
CDC42P60953 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CDC42P60953 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC42P60953 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC42P60953 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC42P60953 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.02□□□□□ -0.17
CDC42P60953 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.02□□□□□ -0.17
CDC42P60953 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC42P60953 AC104692.2-201ENST00000603054 253 ntBASIC14.02□□□□□ -0.17
CDC42P60953 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
CDC42P60953 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC42P60953 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC42P60953 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CDC42P60953 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
CDC42P60953 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.17
CDC42P60953 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CDC42P60953 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC42P60953 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.02□□□□□ -0.17
CDC42P60953 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC42P60953 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42P60953 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CDC42P60953 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42P60953 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42P60953 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC42P60953 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42P60953 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC42P60953 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CDC42P60953 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42P60953 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42P60953 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42P60953 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42P60953 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC42P60953 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 493.9 ms