Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.85■□□□□ 0.45
PPP4CP60510 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PPP4CP60510 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PPP4CP60510 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.85■□□□□ 0.45
PPP4CP60510 AC131206.1-201ENST00000538078 1211 ntBASIC17.85■□□□□ 0.45
PPP4CP60510 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PPP4CP60510 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PPP4CP60510 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.85■□□□□ 0.45
PPP4CP60510 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.85■□□□□ 0.45
PPP4CP60510 AL109954.1-202ENST00000564051 2148 ntBASIC17.85■□□□□ 0.45
PPP4CP60510 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.85■□□□□ 0.45
PPP4CP60510 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.85■□□□□ 0.45
PPP4CP60510 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.85■□□□□ 0.45
PPP4CP60510 AC138035.3-201ENST00000622706 2791 ntBASIC17.85■□□□□ 0.45
PPP4CP60510 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.85■□□□□ 0.45
PPP4CP60510 AP001002.2-201ENST00000625137 386 ntBASIC17.85■□□□□ 0.45
PPP4CP60510 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.85■□□□□ 0.45
PPP4CP60510 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PPP4CP60510 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PPP4CP60510 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PPP4CP60510 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PPP4CP60510 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PPP4CP60510 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.84■□□□□ 0.45
PPP4CP60510 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.84■□□□□ 0.45
PPP4CP60510 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
PPP4CP60510 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.84■□□□□ 0.45
PPP4CP60510 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.84■□□□□ 0.45
PPP4CP60510 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.84■□□□□ 0.45
PPP4CP60510 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.84■□□□□ 0.45
PPP4CP60510 HIST2H2BC-201ENST00000498492 580 ntBASIC17.84■□□□□ 0.45
PPP4CP60510 AC098799.1-201ENST00000504752 800 ntBASIC17.84■□□□□ 0.45
PPP4CP60510 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.84■□□□□ 0.45
PPP4CP60510 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.84■□□□□ 0.45
PPP4CP60510 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.84■□□□□ 0.45
PPP4CP60510 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.84■□□□□ 0.45
PPP4CP60510 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.84■□□□□ 0.45
PPP4CP60510 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.84■□□□□ 0.45
PPP4CP60510 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.84■□□□□ 0.45
PPP4CP60510 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PPP4CP60510 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
PPP4CP60510 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PPP4CP60510 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.84■□□□□ 0.45
PPP4CP60510 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PPP4CP60510 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.84■□□□□ 0.45
PPP4CP60510 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 SALL4P5-201ENST00000419001 1760 ntBASIC17.84■□□□□ 0.45
PPP4CP60510 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP4CP60510 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PPP4CP60510 AC006058.4-201ENST00000624016 1670 ntBASIC17.83■□□□□ 0.45
PPP4CP60510 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PPP4CP60510 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PPP4CP60510 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PPP4CP60510 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PPP4CP60510 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PPP4CP60510 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PPP4CP60510 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
PPP4CP60510 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PPP4CP60510 E2F3P2-201ENST00000447755 1422 ntBASIC17.83■□□□□ 0.45
PPP4CP60510 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PPP4CP60510 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PPP4CP60510 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PPP4CP60510 CICP6-201ENST00000457191 2729 ntBASIC17.83■□□□□ 0.45
PPP4CP60510 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PPP4CP60510 ZBED1P1-201ENST00000502364 1930 ntBASIC17.83■□□□□ 0.44
PPP4CP60510 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PPP4CP60510 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PPP4CP60510 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PPP4CP60510 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PPP4CP60510 AC021723.1-201ENST00000486306 515 ntBASIC17.83■□□□□ 0.44
PPP4CP60510 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.83■□□□□ 0.44
PPP4CP60510 GCOM2-201ENST00000509133 1104 ntBASIC17.83■□□□□ 0.44
PPP4CP60510 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PPP4CP60510 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.83■□□□□ 0.44
PPP4CP60510 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.83■□□□□ 0.44
PPP4CP60510 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PPP4CP60510 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PPP4CP60510 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PPP4CP60510 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PPP4CP60510 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms