Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC11.37□□□□□ -0.59
CMC4P56277 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
CMC4P56277 AC005252.2-201ENST00000624630 1141 ntBASIC11.37□□□□□ -0.59
CMC4P56277 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
CMC4P56277 LINC02199-201ENST00000506655 2702 ntBASIC11.37□□□□□ -0.59
CMC4P56277 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CMC4P56277 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.37□□□□□ -0.59
CMC4P56277 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CMC4P56277 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC11.37□□□□□ -0.59
CMC4P56277 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CMC4P56277 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CMC4P56277 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CMC4P56277 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CMC4P56277 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
CMC4P56277 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.37□□□□□ -0.59
CMC4P56277 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CMC4P56277 C18orf15-201ENST00000623680 2534 ntBASIC11.37□□□□□ -0.59
CMC4P56277 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CMC4P56277 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.37□□□□□ -0.59
CMC4P56277 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CMC4P56277 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CMC4P56277 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.36□□□□□ -0.59
CMC4P56277 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC11.36□□□□□ -0.59
CMC4P56277 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
CMC4P56277 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 AC112693.3-201ENST00000624819 1983 ntBASIC11.36□□□□□ -0.59
CMC4P56277 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.36□□□□□ -0.59
CMC4P56277 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
CMC4P56277 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.36□□□□□ -0.59
CMC4P56277 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.36□□□□□ -0.59
CMC4P56277 AC016694.1-201ENST00000434179 700 ntBASIC11.36□□□□□ -0.59
CMC4P56277 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.36□□□□□ -0.59
CMC4P56277 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
CMC4P56277 AC079316.1-201ENST00000548397 411 ntBASIC11.36□□□□□ -0.59
CMC4P56277 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.36□□□□□ -0.59
CMC4P56277 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.36□□□□□ -0.59
CMC4P56277 MIR5189-201ENST00000577370 114 ntBASIC11.36□□□□□ -0.59
CMC4P56277 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.36□□□□□ -0.59
CMC4P56277 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
CMC4P56277 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 DMBT1P1-203ENST00000636837 4628 ntBASIC11.36□□□□□ -0.59
CMC4P56277 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.36□□□□□ -0.59
CMC4P56277 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
CMC4P56277 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.36□□□□□ -0.59
CMC4P56277 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CMC4P56277 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.35□□□□□ -0.59
CMC4P56277 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.35□□□□□ -0.59
CMC4P56277 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CMC4P56277 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC11.35□□□□□ -0.59
CMC4P56277 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CMC4P56277 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms