Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.08□□□□□ -0.16
CDH11P55287 AC026979.3-201ENST00000607315 403 ntBASIC14.08□□□□□ -0.16
CDH11P55287 AL589739.1-201ENST00000607720 493 ntBASIC14.08□□□□□ -0.16
CDH11P55287 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
CDH11P55287 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH11P55287 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH11P55287 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH11P55287 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH11P55287 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH11P55287 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CDH11P55287 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
CDH11P55287 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH11P55287 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH11P55287 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH11P55287 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH11P55287 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH11P55287 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH11P55287 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH11P55287 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH11P55287 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CDH11P55287 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CDH11P55287 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH11P55287 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH11P55287 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CDH11P55287 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.07□□□□□ -0.16
CDH11P55287 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CDH11P55287 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH11P55287 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CDH11P55287 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.07□□□□□ -0.16
CDH11P55287 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH11P55287 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH11P55287 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.07□□□□□ -0.16
CDH11P55287 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CDH11P55287 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH11P55287 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH11P55287 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 AC190387.1-201ENST00000551683 408 ntBASIC14.07□□□□□ -0.16
CDH11P55287 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH11P55287 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH11P55287 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.07□□□□□ -0.16
CDH11P55287 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CDH11P55287 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH11P55287 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH11P55287 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CDH11P55287 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH11P55287 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH11P55287 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH11P55287 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CDH11P55287 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH11P55287 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH11P55287 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CDH11P55287 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
CDH11P55287 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH11P55287 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH11P55287 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH11P55287 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH11P55287 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH11P55287 CICP11-201ENST00000434745 2827 ntBASIC14.06□□□□□ -0.16
CDH11P55287 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDH11P55287 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH11P55287 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH11P55287 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH11P55287 AL607033.1-201ENST00000623900 1599 ntBASIC14.06□□□□□ -0.16
CDH11P55287 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CDH11P55287 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH11P55287 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH11P55287 ACE3P-201ENST00000423435 1973 ntBASIC14.06□□□□□ -0.16
CDH11P55287 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH11P55287 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH11P55287 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms