Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.33□□□□□ -0.28
ATP1B3P54709 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ATP1B3P54709 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.33□□□□□ -0.28
ATP1B3P54709 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.33□□□□□ -0.28
ATP1B3P54709 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.33□□□□□ -0.28
ATP1B3P54709 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 AC069262.1-201ENST00000539058 672 ntBASIC13.33□□□□□ -0.28
ATP1B3P54709 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.33□□□□□ -0.28
ATP1B3P54709 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
ATP1B3P54709 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.33□□□□□ -0.28
ATP1B3P54709 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.33□□□□□ -0.28
ATP1B3P54709 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ATP1B3P54709 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.33□□□□□ -0.28
ATP1B3P54709 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.33□□□□□ -0.28
ATP1B3P54709 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.33□□□□□ -0.28
ATP1B3P54709 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.33□□□□□ -0.28
ATP1B3P54709 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.33□□□□□ -0.28
ATP1B3P54709 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.33□□□□□ -0.28
ATP1B3P54709 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.33□□□□□ -0.28
ATP1B3P54709 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.32□□□□□ -0.28
ATP1B3P54709 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 Z97205.2-201ENST00000564697 1639 ntBASIC13.32□□□□□ -0.28
ATP1B3P54709 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.32□□□□□ -0.28
ATP1B3P54709 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.32□□□□□ -0.28
ATP1B3P54709 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.32□□□□□ -0.28
ATP1B3P54709 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.32□□□□□ -0.28
ATP1B3P54709 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.32□□□□□ -0.28
ATP1B3P54709 AL133267.1-201ENST00000398220 340 ntBASIC13.32□□□□□ -0.28
ATP1B3P54709 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.32□□□□□ -0.28
ATP1B3P54709 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.32□□□□□ -0.28
ATP1B3P54709 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.32□□□□□ -0.28
ATP1B3P54709 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.32□□□□□ -0.28
ATP1B3P54709 AC015910.1-201ENST00000579400 975 ntBASIC13.32□□□□□ -0.28
ATP1B3P54709 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.32□□□□□ -0.28
ATP1B3P54709 LINC00628-201ENST00000628516 1289 ntBASIC13.32□□□□□ -0.28
ATP1B3P54709 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 LINC01230-201ENST00000625222 3017 ntBASIC13.32□□□□□ -0.28
ATP1B3P54709 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.32□□□□□ -0.28
ATP1B3P54709 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
ATP1B3P54709 AC006504.5-208ENST00000588784 2401 ntBASIC13.32□□□□□ -0.28
ATP1B3P54709 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ATP1B3P54709 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ATP1B3P54709 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ATP1B3P54709 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.32□□□□□ -0.28
ATP1B3P54709 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ATP1B3P54709 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ATP1B3P54709 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ATP1B3P54709 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.31□□□□□ -0.28
ATP1B3P54709 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.31□□□□□ -0.28
ATP1B3P54709 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.31□□□□□ -0.28
ATP1B3P54709 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.31□□□□□ -0.28
ATP1B3P54709 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ATP1B3P54709 AC010327.5-201ENST00000586923 3061 ntBASIC13.31□□□□□ -0.28
ATP1B3P54709 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ATP1B3P54709 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms