Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC006058.4-201ENST00000624016 1670 ntBASIC15.72■□□□□ 0.11
ATXN3P54252 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATXN3P54252 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATXN3P54252 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ATXN3P54252 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ATXN3P54252 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATXN3P54252 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ATXN3P54252 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ATXN3P54252 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.71■□□□□ 0.11
ATXN3P54252 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 AC139749.1-202ENST00000617529 3139 ntBASIC15.71■□□□□ 0.11
ATXN3P54252 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.71■□□□□ 0.11
ATXN3P54252 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ATXN3P54252 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 AC099336.1-201ENST00000417053 1171 ntBASIC15.71■□□□□ 0.11
ATXN3P54252 YBX1P6-201ENST00000442962 1002 ntBASIC15.71■□□□□ 0.11
ATXN3P54252 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.71■□□□□ 0.11
ATXN3P54252 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 AC099548.2-209ENST00000480264 625 ntBASIC15.71■□□□□ 0.11
ATXN3P54252 RPL13AP25-201ENST00000484130 612 ntBASIC15.71■□□□□ 0.11
ATXN3P54252 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.71■□□□□ 0.11
ATXN3P54252 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.71■□□□□ 0.11
ATXN3P54252 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.71■□□□□ 0.11
ATXN3P54252 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.71■□□□□ 0.11
ATXN3P54252 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ATXN3P54252 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.71■□□□□ 0.11
ATXN3P54252 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ATXN3P54252 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATXN3P54252 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.71■□□□□ 0.11
ATXN3P54252 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
ATXN3P54252 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.71■□□□□ 0.1
ATXN3P54252 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
ATXN3P54252 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
ATXN3P54252 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.71■□□□□ 0.1
ATXN3P54252 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.71■□□□□ 0.1
ATXN3P54252 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
ATXN3P54252 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 MYO15B-237ENST00000642007 4893 ntBASIC15.7■□□□□ 0.1
ATXN3P54252 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ATXN3P54252 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.7■□□□□ 0.1
ATXN3P54252 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.7■□□□□ 0.1
ATXN3P54252 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.7■□□□□ 0.1
ATXN3P54252 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.7■□□□□ 0.1
ATXN3P54252 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.7■□□□□ 0.1
ATXN3P54252 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.7■□□□□ 0.1
ATXN3P54252 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.7■□□□□ 0.1
ATXN3P54252 ENPP7P5-201ENST00000541031 1031 ntBASIC15.7■□□□□ 0.1
ATXN3P54252 MIR4321-201ENST00000592276 80 ntBASIC15.7■□□□□ 0.1
ATXN3P54252 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 AC010328.2-201ENST00000597698 1111 ntBASIC15.7■□□□□ 0.1
ATXN3P54252 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 AL136982.4-201ENST00000437689 1740 ntBASIC15.7■□□□□ 0.1
ATXN3P54252 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATXN3P54252 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.7■□□□□ 0.1
ATXN3P54252 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ATXN3P54252 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms