Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.98□□□□□ -0.33
NKX2-5P52952 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 C1QBPP2-201ENST00000528754 825 ntBASIC12.98□□□□□ -0.33
NKX2-5P52952 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX2-5P52952 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX2-5P52952 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.98□□□□□ -0.33
NKX2-5P52952 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX2-5P52952 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.98□□□□□ -0.33
NKX2-5P52952 AC006058.3-201ENST00000606217 1069 ntBASIC12.98□□□□□ -0.33
NKX2-5P52952 REXO1L3P-201ENST00000622202 1288 ntBASIC12.98□□□□□ -0.33
NKX2-5P52952 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NKX2-5P52952 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.98□□□□□ -0.33
NKX2-5P52952 KHSRPP1-201ENST00000427983 1768 ntBASIC12.98□□□□□ -0.33
NKX2-5P52952 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
NKX2-5P52952 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NKX2-5P52952 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX2-5P52952 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NKX2-5P52952 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX2-5P52952 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NKX2-5P52952 AC010536.1-201ENST00000538868 2611 ntBASIC12.98□□□□□ -0.33
NKX2-5P52952 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX2-5P52952 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX2-5P52952 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NKX2-5P52952 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX2-5P52952 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX2-5P52952 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
NKX2-5P52952 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX2-5P52952 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.97□□□□□ -0.33
NKX2-5P52952 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX2-5P52952 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX2-5P52952 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 REXO1L10P-201ENST00000615707 1290 ntBASIC12.97□□□□□ -0.33
NKX2-5P52952 REXO1L12P-201ENST00000622156 912 ntBASIC12.97□□□□□ -0.33
NKX2-5P52952 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX2-5P52952 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX2-5P52952 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NKX2-5P52952 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NKX2-5P52952 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 FAM90A11P-201ENST00000518378 2218 ntBASIC12.97□□□□□ -0.33
NKX2-5P52952 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NKX2-5P52952 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NKX2-5P52952 AGAP10P-201ENST00000454844 2418 ntBASIC12.97□□□□□ -0.33
NKX2-5P52952 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NKX2-5P52952 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX2-5P52952 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.96□□□□□ -0.33
NKX2-5P52952 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 PCDHB19P-202ENST00000625133 2914 ntBASIC12.96□□□□□ -0.33
NKX2-5P52952 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms