Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.82■□□□□ 0.28
GPC3P51654 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GPC3P51654 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.82■□□□□ 0.28
GPC3P51654 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC3P51654 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GPC3P51654 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GPC3P51654 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC3P51654 AC144831.1-201ENST00000573312 2656 ntBASIC16.81■□□□□ 0.28
GPC3P51654 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC3P51654 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC3P51654 BRWD1P1-201ENST00000401091 371 ntBASIC16.81■□□□□ 0.28
GPC3P51654 MIR1202-201ENST00000408529 83 ntBASIC16.81■□□□□ 0.28
GPC3P51654 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.81■□□□□ 0.28
GPC3P51654 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.81■□□□□ 0.28
GPC3P51654 RPL13AP20-201ENST00000459725 609 ntBASIC16.81■□□□□ 0.28
GPC3P51654 AC022494.1-201ENST00000466044 728 ntBASIC16.81■□□□□ 0.28
GPC3P51654 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC3P51654 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 RN7SL560P-201ENST00000577943 264 ntBASIC16.81■□□□□ 0.28
GPC3P51654 MIR4525-201ENST00000580000 75 ntBASIC16.81■□□□□ 0.28
GPC3P51654 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.81■□□□□ 0.28
GPC3P51654 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.81■□□□□ 0.28
GPC3P51654 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GPC3P51654 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.81■□□□□ 0.28
GPC3P51654 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.81■□□□□ 0.28
GPC3P51654 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.81■□□□□ 0.28
GPC3P51654 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GPC3P51654 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GPC3P51654 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.81■□□□□ 0.28
GPC3P51654 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GPC3P51654 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GPC3P51654 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.8■□□□□ 0.28
GPC3P51654 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.8■□□□□ 0.28
GPC3P51654 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GPC3P51654 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC3P51654 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GPC3P51654 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.8■□□□□ 0.28
GPC3P51654 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.8■□□□□ 0.28
GPC3P51654 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC3P51654 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.8■□□□□ 0.28
GPC3P51654 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 MIR6869-201ENST00000619434 62 ntBASIC16.8■□□□□ 0.28
GPC3P51654 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
GPC3P51654 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.8■□□□□ 0.28
GPC3P51654 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
GPC3P51654 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GPC3P51654 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GPC3P51654 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.79■□□□□ 0.28
GPC3P51654 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
GPC3P51654 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC3P51654 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.79■□□□□ 0.28
GPC3P51654 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.79■□□□□ 0.28
GPC3P51654 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.79■□□□□ 0.28
GPC3P51654 LINC00554-201ENST00000564841 3011 ntBASIC16.79■□□□□ 0.28
GPC3P51654 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GPC3P51654 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.79■□□□□ 0.28
GPC3P51654 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC3P51654 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
GPC3P51654 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GPC3P51654 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC3P51654 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
GPC3P51654 TPM3P8-201ENST00000330554 643 ntBASIC16.79■□□□□ 0.28
GPC3P51654 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.79■□□□□ 0.28
GPC3P51654 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
GPC3P51654 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC3P51654 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms