Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSR4P51571 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SSR4P51571 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SSR4P51571 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.97□□□□□ -0.17
SSR4P51571 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.97□□□□□ -0.17
SSR4P51571 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SSR4P51571 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SSR4P51571 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.97□□□□□ -0.17
SSR4P51571 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SSR4P51571 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 AC023024.2-201ENST00000623561 1993 ntBASIC13.97□□□□□ -0.17
SSR4P51571 AL157414.3-201ENST00000624276 1954 ntBASIC13.97□□□□□ -0.17
SSR4P51571 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
SSR4P51571 MIR1202-201ENST00000408529 83 ntBASIC13.97□□□□□ -0.17
SSR4P51571 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.97□□□□□ -0.17
SSR4P51571 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.97□□□□□ -0.17
SSR4P51571 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.97□□□□□ -0.17
SSR4P51571 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.97□□□□□ -0.17
SSR4P51571 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SSR4P51571 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SSR4P51571 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.97□□□□□ -0.17
SSR4P51571 AL033527.4-201ENST00000641026 673 ntBASIC13.97□□□□□ -0.17
SSR4P51571 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.97□□□□□ -0.17
SSR4P51571 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.97□□□□□ -0.17
SSR4P51571 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SSR4P51571 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.97□□□□□ -0.17
SSR4P51571 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.97□□□□□ -0.17
SSR4P51571 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSR4P51571 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SSR4P51571 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.96□□□□□ -0.17
SSR4P51571 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.96□□□□□ -0.17
SSR4P51571 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.96□□□□□ -0.17
SSR4P51571 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.96□□□□□ -0.17
SSR4P51571 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SSR4P51571 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SSR4P51571 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.96□□□□□ -0.17
SSR4P51571 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.96□□□□□ -0.17
SSR4P51571 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.96□□□□□ -0.17
SSR4P51571 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.96□□□□□ -0.17
SSR4P51571 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SSR4P51571 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.96□□□□□ -0.17
SSR4P51571 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SSR4P51571 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.96□□□□□ -0.17
SSR4P51571 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.96□□□□□ -0.17
SSR4P51571 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.96□□□□□ -0.17
SSR4P51571 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 DUX4L47-201ENST00000566374 394 ntBASIC13.96□□□□□ -0.17
SSR4P51571 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.96□□□□□ -0.17
SSR4P51571 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.96□□□□□ -0.17
SSR4P51571 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SSR4P51571 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SSR4P51571 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSR4P51571 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SSR4P51571 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
SSR4P51571 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.96□□□□□ -0.18
SSR4P51571 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.96□□□□□ -0.18
SSR4P51571 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SSR4P51571 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSR4P51571 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms