Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MRE11P49959 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.92■□□□□ 0.46
MRE11P49959 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MRE11P49959 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC17.92■□□□□ 0.46
MRE11P49959 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MRE11P49959 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
MRE11P49959 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
MRE11P49959 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.92■□□□□ 0.46
MRE11P49959 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MRE11P49959 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 AC015802.1-201ENST00000588104 1449 ntBASIC17.92■□□□□ 0.46
MRE11P49959 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC17.92■□□□□ 0.46
MRE11P49959 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC17.92■□□□□ 0.46
MRE11P49959 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.92■□□□□ 0.46
MRE11P49959 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.92■□□□□ 0.46
MRE11P49959 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.92■□□□□ 0.46
MRE11P49959 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MRE11P49959 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
MRE11P49959 NME2P1-201ENST00000426182 414 ntBASIC17.92■□□□□ 0.46
MRE11P49959 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.92■□□□□ 0.46
MRE11P49959 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.92■□□□□ 0.46
MRE11P49959 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.92■□□□□ 0.46
MRE11P49959 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.92■□□□□ 0.46
MRE11P49959 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.92■□□□□ 0.46
MRE11P49959 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.92■□□□□ 0.46
MRE11P49959 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MRE11P49959 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
MRE11P49959 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC17.92■□□□□ 0.46
MRE11P49959 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MRE11P49959 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.92■□□□□ 0.46
MRE11P49959 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
MRE11P49959 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.92■□□□□ 0.46
MRE11P49959 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MRE11P49959 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
MRE11P49959 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.91■□□□□ 0.46
MRE11P49959 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.91■□□□□ 0.46
MRE11P49959 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.91■□□□□ 0.46
MRE11P49959 KRT18P27-201ENST00000427733 1299 ntBASIC17.91■□□□□ 0.46
MRE11P49959 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.91■□□□□ 0.46
MRE11P49959 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
MRE11P49959 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
MRE11P49959 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
MRE11P49959 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.91■□□□□ 0.46
MRE11P49959 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
MRE11P49959 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
MRE11P49959 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.91■□□□□ 0.46
MRE11P49959 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.91■□□□□ 0.46
MRE11P49959 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC17.91■□□□□ 0.46
MRE11P49959 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.91■□□□□ 0.46
MRE11P49959 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC17.91■□□□□ 0.46
MRE11P49959 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.91■□□□□ 0.46
MRE11P49959 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.91■□□□□ 0.46
MRE11P49959 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC17.91■□□□□ 0.46
MRE11P49959 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.91■□□□□ 0.46
MRE11P49959 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
MRE11P49959 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRE11P49959 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC17.9■□□□□ 0.46
MRE11P49959 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.9■□□□□ 0.46
MRE11P49959 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
MRE11P49959 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MRE11P49959 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms