Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2AP49459 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
UBE2AP49459 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2AP49459 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2AP49459 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
UBE2AP49459 STOM-202ENST00000347359 870 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2AP49459 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC9.77□□□□□ -0.85
UBE2AP49459 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 HNRNPFP1-201ENST00000391730 1133 ntBASIC9.77□□□□□ -0.85
UBE2AP49459 RBM39-205ENST00000397370 612 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2AP49459 CNN2P11-201ENST00000429351 262 ntBASIC9.77□□□□□ -0.85
UBE2AP49459 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC9.77□□□□□ -0.85
UBE2AP49459 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC9.77□□□□□ -0.85
UBE2AP49459 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC9.77□□□□□ -0.85
UBE2AP49459 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC9.77□□□□□ -0.85
UBE2AP49459 AC112482.1-201ENST00000492080 688 ntBASIC9.77□□□□□ -0.85
UBE2AP49459 CALM1-205ENST00000553542 877 ntTSL 5 BASIC9.77□□□□□ -0.85
UBE2AP49459 LITAF-210ENST00000571976 548 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2AP49459 LITAF-214ENST00000574703 486 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2AP49459 PRR29-209ENST00000582540 967 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2AP49459 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC9.77□□□□□ -0.85
UBE2AP49459 AC007967.4-201ENST00000614700 386 ntBASIC9.77□□□□□ -0.85
UBE2AP49459 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC9.77□□□□□ -0.85
UBE2AP49459 AC084121.4-201ENST00000641598 221 ntBASIC9.77□□□□□ -0.85
UBE2AP49459 AF228730.8-201ENST00000642140 221 ntBASIC9.77□□□□□ -0.85
UBE2AP49459 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC9.77□□□□□ -0.85
UBE2AP49459 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 AL109954.1-202ENST00000564051 2148 ntBASIC9.77□□□□□ -0.85
UBE2AP49459 AL359183.1-201ENST00000623796 2132 ntBASIC9.77□□□□□ -0.85
UBE2AP49459 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC9.77□□□□□ -0.85
UBE2AP49459 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
UBE2AP49459 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 CETN4P-206ENST00000642099 2168 ntBASIC9.77□□□□□ -0.85
UBE2AP49459 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2AP49459 GRAMD4P3-201ENST00000621665 1669 ntBASIC9.77□□□□□ -0.85
UBE2AP49459 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2AP49459 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2AP49459 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC9.77□□□□□ -0.85
UBE2AP49459 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC9.76□□□□□ -0.85
UBE2AP49459 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC9.76□□□□□ -0.85
UBE2AP49459 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
UBE2AP49459 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 AC105250.1-201ENST00000509378 2057 ntBASIC9.76□□□□□ -0.85
UBE2AP49459 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC9.76□□□□□ -0.85
UBE2AP49459 AC138035.3-201ENST00000622706 2791 ntBASIC9.76□□□□□ -0.85
UBE2AP49459 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC9.76□□□□□ -0.85
UBE2AP49459 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC9.76□□□□□ -0.85
UBE2AP49459 AC090616.6-203ENST00000579186 1945 ntBASIC9.76□□□□□ -0.85
UBE2AP49459 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC9.76□□□□□ -0.85
UBE2AP49459 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
UBE2AP49459 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC9.76□□□□□ -0.85
UBE2AP49459 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC9.76□□□□□ -0.85
UBE2AP49459 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
UBE2AP49459 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC9.76□□□□□ -0.85
UBE2AP49459 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC9.76□□□□□ -0.85
UBE2AP49459 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
UBE2AP49459 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
UBE2AP49459 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC9.76□□□□□ -0.85
UBE2AP49459 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC9.76□□□□□ -0.85
UBE2AP49459 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC9.76□□□□□ -0.85
UBE2AP49459 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2AP49459 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
UBE2AP49459 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms