Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC1A3P43003 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 MIR770-201ENST00000390219 98 ntBASIC14.1□□□□□ -0.15
SLC1A3P43003 MRPS18AP1-201ENST00000414458 589 ntBASIC14.1□□□□□ -0.15
SLC1A3P43003 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC1A3P43003 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC1A3P43003 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A3P43003 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC1A3P43003 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A3P43003 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A3P43003 AL158212.4-201ENST00000624062 1286 ntBASIC14.1□□□□□ -0.15
SLC1A3P43003 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A3P43003 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A3P43003 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SLC1A3P43003 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A3P43003 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A3P43003 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SLC1A3P43003 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SLC1A3P43003 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC1A3P43003 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC1A3P43003 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 HMGN1P19-201ENST00000436976 333 ntBASIC14.09□□□□□ -0.15
SLC1A3P43003 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC1A3P43003 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 SPDYE18-201ENST00000510091 1050 ntBASIC14.09□□□□□ -0.15
SLC1A3P43003 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.09□□□□□ -0.15
SLC1A3P43003 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC1A3P43003 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
SLC1A3P43003 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SLC1A3P43003 AC140479.7-201ENST00000636301 2332 ntBASIC14.09□□□□□ -0.15
SLC1A3P43003 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC1A3P43003 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC1A3P43003 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SLC1A3P43003 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC1A3P43003 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A3P43003 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC1A3P43003 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
SLC1A3P43003 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC1A3P43003 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC1A3P43003 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC1A3P43003 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC1A3P43003 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC1A3P43003 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SLC1A3P43003 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
SLC1A3P43003 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
SLC1A3P43003 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.08□□□□□ -0.16
SLC1A3P43003 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.08□□□□□ -0.16
SLC1A3P43003 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.08□□□□□ -0.16
SLC1A3P43003 AL589987.1-201ENST00000453380 819 ntBASIC14.08□□□□□ -0.16
SLC1A3P43003 INGX-202ENST00000489074 768 ntBASIC14.08□□□□□ -0.16
SLC1A3P43003 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 RARRES2P5-201ENST00000564013 466 ntBASIC14.08□□□□□ -0.16
SLC1A3P43003 AC104794.3-201ENST00000566840 1248 ntBASIC14.08□□□□□ -0.16
SLC1A3P43003 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.08□□□□□ -0.16
SLC1A3P43003 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms