Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.09■□□□□ 0.65
COL15A1P39059 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.08■□□□□ 0.65
COL15A1P39059 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL15A1P39059 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
COL15A1P39059 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.08■□□□□ 0.65
COL15A1P39059 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
COL15A1P39059 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.08■□□□□ 0.65
COL15A1P39059 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.08■□□□□ 0.65
COL15A1P39059 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.08■□□□□ 0.65
COL15A1P39059 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL15A1P39059 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC19.08■□□□□ 0.65
COL15A1P39059 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC19.08■□□□□ 0.65
COL15A1P39059 RPL17P11-201ENST00000417593 544 ntBASIC19.08■□□□□ 0.65
COL15A1P39059 AC008267.1-201ENST00000474858 1069 ntBASIC19.08■□□□□ 0.65
COL15A1P39059 RPL18P13-201ENST00000478088 569 ntBASIC19.08■□□□□ 0.65
COL15A1P39059 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC19.08■□□□□ 0.65
COL15A1P39059 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL15A1P39059 DUX4L46-201ENST00000566845 751 ntBASIC19.08■□□□□ 0.65
COL15A1P39059 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.08■□□□□ 0.65
COL15A1P39059 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL15A1P39059 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
COL15A1P39059 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL15A1P39059 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL15A1P39059 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.08■□□□□ 0.64
COL15A1P39059 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
COL15A1P39059 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
COL15A1P39059 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
COL15A1P39059 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL15A1P39059 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
COL15A1P39059 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
COL15A1P39059 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL15A1P39059 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL15A1P39059 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
COL15A1P39059 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL15A1P39059 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC19.08■□□□□ 0.64
COL15A1P39059 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL15A1P39059 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL15A1P39059 AC105917.1-201ENST00000506637 2539 ntBASIC19.08■□□□□ 0.64
COL15A1P39059 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL15A1P39059 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.07■□□□□ 0.64
COL15A1P39059 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
COL15A1P39059 AC006335.1-201ENST00000445200 547 ntBASIC19.07■□□□□ 0.64
COL15A1P39059 PUDPP3-201ENST00000445368 636 ntBASIC19.07■□□□□ 0.64
COL15A1P39059 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.07■□□□□ 0.64
COL15A1P39059 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.07■□□□□ 0.64
COL15A1P39059 SNORD3B-2-202ENST00000571722 791 ntBASIC19.07■□□□□ 0.64
COL15A1P39059 AL132994.2-201ENST00000603120 687 ntBASIC19.07■□□□□ 0.64
COL15A1P39059 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC19.07■□□□□ 0.64
COL15A1P39059 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.07■□□□□ 0.64
COL15A1P39059 MIR7845-201ENST00000618396 99 ntBASIC19.07■□□□□ 0.64
COL15A1P39059 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
COL15A1P39059 AL137783.1-201ENST00000623494 1896 ntBASIC19.07■□□□□ 0.64
COL15A1P39059 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.07■□□□□ 0.64
COL15A1P39059 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 C18orf15-201ENST00000623680 2534 ntBASIC19.07■□□□□ 0.64
COL15A1P39059 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
COL15A1P39059 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.07■□□□□ 0.64
COL15A1P39059 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
COL15A1P39059 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL15A1P39059 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
COL15A1P39059 RN7SKP230-201ENST00000365642 335 ntBASIC19.06■□□□□ 0.64
COL15A1P39059 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.06■□□□□ 0.64
COL15A1P39059 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.06■□□□□ 0.64
COL15A1P39059 VDAC1P1-201ENST00000439229 848 ntBASIC19.06■□□□□ 0.64
COL15A1P39059 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.06■□□□□ 0.64
COL15A1P39059 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.06■□□□□ 0.64
COL15A1P39059 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
COL15A1P39059 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.06■□□□□ 0.64
COL15A1P39059 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.06■□□□□ 0.64
COL15A1P39059 AC009779.1-201ENST00000551138 283 ntBASIC19.06■□□□□ 0.64
COL15A1P39059 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC19.06■□□□□ 0.64
COL15A1P39059 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.06■□□□□ 0.64
COL15A1P39059 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.06■□□□□ 0.64
COL15A1P39059 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 AC020910.5-201ENST00000623668 1865 ntBASIC19.06■□□□□ 0.64
COL15A1P39059 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
COL15A1P39059 AC012508.2-201ENST00000567613 1472 ntBASIC19.06■□□□□ 0.64
COL15A1P39059 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL15A1P39059 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms