Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT20P35900 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
KRT20P35900 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
KRT20P35900 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT20P35900 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
KRT20P35900 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT20P35900 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT20P35900 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT20P35900 MROH4P-201ENST00000431302 1578 ntBASIC14.61□□□□□ -0.07
KRT20P35900 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT20P35900 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT20P35900 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.61□□□□□ -0.07
KRT20P35900 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.61□□□□□ -0.07
KRT20P35900 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.61□□□□□ -0.07
KRT20P35900 AC136604.1-201ENST00000418535 575 ntBASIC14.61□□□□□ -0.07
KRT20P35900 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.61□□□□□ -0.07
KRT20P35900 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.61□□□□□ -0.07
KRT20P35900 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.61□□□□□ -0.07
KRT20P35900 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.61□□□□□ -0.07
KRT20P35900 TIMM17BP1-201ENST00000545713 516 ntBASIC14.61□□□□□ -0.07
KRT20P35900 AC010336.2-201ENST00000564226 506 ntBASIC14.61□□□□□ -0.07
KRT20P35900 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.61□□□□□ -0.07
KRT20P35900 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT20P35900 AC011467.4-201ENST00000594891 528 ntBASIC14.61□□□□□ -0.07
KRT20P35900 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT20P35900 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.61□□□□□ -0.07
KRT20P35900 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.61□□□□□ -0.07
KRT20P35900 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
KRT20P35900 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 ST20-AS1-201ENST00000560255 4223 ntBASIC14.61□□□□□ -0.07
KRT20P35900 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KRT20P35900 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT20P35900 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
KRT20P35900 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.6□□□□□ -0.07
KRT20P35900 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT20P35900 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.6□□□□□ -0.07
KRT20P35900 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
KRT20P35900 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.6□□□□□ -0.07
KRT20P35900 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.6□□□□□ -0.07
KRT20P35900 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.6□□□□□ -0.07
KRT20P35900 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
KRT20P35900 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.6□□□□□ -0.07
KRT20P35900 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT20P35900 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.6□□□□□ -0.07
KRT20P35900 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.6□□□□□ -0.07
KRT20P35900 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT20P35900 AC005498.2-205ENST00000593218 784 ntBASIC14.6□□□□□ -0.07
KRT20P35900 AL109936.8-201ENST00000641772 604 ntBASIC14.6□□□□□ -0.07
KRT20P35900 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
KRT20P35900 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT20P35900 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.6□□□□□ -0.07
KRT20P35900 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT20P35900 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.6□□□□□ -0.07
KRT20P35900 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.6□□□□□ -0.07
KRT20P35900 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KRT20P35900 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms