Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 AL121723.1-201ENST00000445194 1519 ntBASIC14.25□□□□□ -0.13
TNFRSF1BP20333 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFRSF1BP20333 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 GRK6P1-201ENST00000400595 1711 ntBASIC14.24□□□□□ -0.13
TNFRSF1BP20333 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 AC015922.1-201ENST00000421102 1152 ntBASIC14.24□□□□□ -0.13
TNFRSF1BP20333 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.24□□□□□ -0.13
TNFRSF1BP20333 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 AL512361.1-201ENST00000554200 418 ntBASIC14.24□□□□□ -0.13
TNFRSF1BP20333 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.24□□□□□ -0.13
TNFRSF1BP20333 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFRSF1BP20333 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.23□□□□□ -0.13
TNFRSF1BP20333 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFRSF1BP20333 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms