Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.39■□□□□ 0.05
KRT4P19013 MED15P5-201ENST00000423150 992 ntBASIC15.39■□□□□ 0.05
KRT4P19013 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT4P19013 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.39■□□□□ 0.05
KRT4P19013 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT4P19013 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT4P19013 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT4P19013 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT4P19013 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.39■□□□□ 0.05
KRT4P19013 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.39■□□□□ 0.05
KRT4P19013 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.39■□□□□ 0.05
KRT4P19013 AC027601.4-201ENST00000611259 610 ntBASIC15.39■□□□□ 0.05
KRT4P19013 AC055717.3-201ENST00000622967 595 ntBASIC15.39■□□□□ 0.05
KRT4P19013 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT4P19013 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT4P19013 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT4P19013 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
KRT4P19013 AC007787.1-201ENST00000588095 1583 ntBASIC15.39■□□□□ 0.05
KRT4P19013 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT4P19013 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT4P19013 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
KRT4P19013 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT4P19013 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT4P19013 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KRT4P19013 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT4P19013 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.39■□□□□ 0.05
KRT4P19013 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT4P19013 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.39■□□□□ 0.05
KRT4P19013 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT4P19013 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KRT4P19013 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.39■□□□□ 0.05
KRT4P19013 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
KRT4P19013 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.38■□□□□ 0.05
KRT4P19013 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.38■□□□□ 0.05
KRT4P19013 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.38■□□□□ 0.05
KRT4P19013 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.38■□□□□ 0.05
KRT4P19013 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.38■□□□□ 0.05
KRT4P19013 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
KRT4P19013 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 AC079781.5-202ENST00000641784 3743 ntBASIC15.38■□□□□ 0.05
KRT4P19013 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.38■□□□□ 0.05
KRT4P19013 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.38■□□□□ 0.05
KRT4P19013 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.38■□□□□ 0.05
KRT4P19013 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.38■□□□□ 0.05
KRT4P19013 AC015802.1-201ENST00000588104 1449 ntBASIC15.38■□□□□ 0.05
KRT4P19013 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
KRT4P19013 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.38■□□□□ 0.05
KRT4P19013 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 AL645728.2-202ENST00000641679 227 ntBASIC15.38■□□□□ 0.05
KRT4P19013 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
KRT4P19013 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
KRT4P19013 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.38■□□□□ 0.05
KRT4P19013 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
KRT4P19013 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
KRT4P19013 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
KRT4P19013 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.38■□□□□ 0.05
KRT4P19013 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.38■□□□□ 0.05
KRT4P19013 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
KRT4P19013 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.38■□□□□ 0.05
KRT4P19013 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.37■□□□□ 0.05
KRT4P19013 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT4P19013 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT4P19013 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
KRT4P19013 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KRT4P19013 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KRT4P19013 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT4P19013 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT4P19013 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.37■□□□□ 0.05
KRT4P19013 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
KRT4P19013 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
KRT4P19013 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
KRT4P19013 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
KRT4P19013 AC104457.1-201ENST00000401024 814 ntBASIC15.37■□□□□ 0.05
KRT4P19013 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.37■□□□□ 0.05
KRT4P19013 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.37■□□□□ 0.05
KRT4P19013 AC074338.1-201ENST00000416825 156 ntBASIC15.37■□□□□ 0.05
KRT4P19013 AC023274.1-201ENST00000418278 595 ntBASIC15.37■□□□□ 0.05
KRT4P19013 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.37■□□□□ 0.05
KRT4P19013 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.37■□□□□ 0.05
KRT4P19013 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.37■□□□□ 0.05
KRT4P19013 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.37■□□□□ 0.05
KRT4P19013 SLED1-202ENST00000512051 380 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms