Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC1P18887 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC1P18887 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC1P18887 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC1P18887 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC1P18887 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.29■□□□□ 0.04
XRCC1P18887 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC1P18887 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC1P18887 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
XRCC1P18887 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC1P18887 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC1P18887 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
XRCC1P18887 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
XRCC1P18887 AL442647.2-201ENST00000429864 857 ntBASIC15.29■□□□□ 0.04
XRCC1P18887 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC1P18887 INE1-201ENST00000456273 945 ntBASIC15.29■□□□□ 0.04
XRCC1P18887 FAM86LP-201ENST00000478302 853 ntBASIC15.29■□□□□ 0.04
XRCC1P18887 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC1P18887 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.29■□□□□ 0.04
XRCC1P18887 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.29■□□□□ 0.04
XRCC1P18887 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
XRCC1P18887 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
XRCC1P18887 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC1P18887 WFDC1-204ENST00000613603 549 ntBASIC15.29■□□□□ 0.04
XRCC1P18887 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
XRCC1P18887 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC1P18887 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XRCC1P18887 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.28■□□□□ 0.04
XRCC1P18887 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.28■□□□□ 0.04
XRCC1P18887 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
XRCC1P18887 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.28■□□□□ 0.04
XRCC1P18887 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
XRCC1P18887 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
XRCC1P18887 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
XRCC1P18887 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 AL512384.1-201ENST00000406683 331 ntBASIC15.28■□□□□ 0.04
XRCC1P18887 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.28■□□□□ 0.04
XRCC1P18887 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.28■□□□□ 0.04
XRCC1P18887 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.28■□□□□ 0.04
XRCC1P18887 AC000095.1-201ENST00000603208 874 ntBASIC15.28■□□□□ 0.04
XRCC1P18887 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
XRCC1P18887 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.28■□□□□ 0.04
XRCC1P18887 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
XRCC1P18887 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
XRCC1P18887 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
XRCC1P18887 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
XRCC1P18887 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 AC005840.4-201ENST00000541242 2494 ntBASIC15.27■□□□□ 0.04
XRCC1P18887 AJ011931.1-201ENST00000618749 2492 ntBASIC15.27■□□□□ 0.04
XRCC1P18887 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.27■□□□□ 0.04
XRCC1P18887 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.27■□□□□ 0.04
XRCC1P18887 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.27■□□□□ 0.04
XRCC1P18887 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.27■□□□□ 0.04
XRCC1P18887 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.27■□□□□ 0.04
XRCC1P18887 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.27■□□□□ 0.04
XRCC1P18887 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.27■□□□□ 0.04
XRCC1P18887 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
XRCC1P18887 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
XRCC1P18887 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
XRCC1P18887 AL133267.1-201ENST00000398220 340 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms