Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC21.79■■□□□ 1.08
CHGAP10645 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC21.79■■□□□ 1.08
CHGAP10645 AC090164.2-201ENST00000611487 516 ntBASIC21.79■■□□□ 1.08
CHGAP10645 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC21.79■■□□□ 1.08
CHGAP10645 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC21.79■■□□□ 1.08
CHGAP10645 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC21.79■■□□□ 1.08
CHGAP10645 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CHGAP10645 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CHGAP10645 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CHGAP10645 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 AP000593.2-201ENST00000542775 1433 ntBASIC21.79■■□□□ 1.08
CHGAP10645 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 AL360270.3-201ENST00000609118 1348 ntBASIC21.79■■□□□ 1.08
CHGAP10645 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 AL157791.1-201ENST00000553667 1699 ntBASIC21.79■■□□□ 1.08
CHGAP10645 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHGAP10645 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC21.78■■□□□ 1.08
CHGAP10645 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CHGAP10645 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CHGAP10645 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CHGAP10645 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC21.78■■□□□ 1.08
CHGAP10645 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 AL137783.1-201ENST00000623494 1896 ntBASIC21.78■■□□□ 1.08
CHGAP10645 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHGAP10645 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC21.78■■□□□ 1.08
CHGAP10645 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CHGAP10645 UFM1-202ENST00000379649 846 ntTSL 4 BASIC21.78■■□□□ 1.08
CHGAP10645 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 RPL5P21-201ENST00000404620 815 ntBASIC21.78■■□□□ 1.08
CHGAP10645 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 AC069218.1-201ENST00000435269 762 ntBASIC21.78■■□□□ 1.08
CHGAP10645 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC21.78■■□□□ 1.08
CHGAP10645 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC21.78■■□□□ 1.08
CHGAP10645 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC21.78■■□□□ 1.08
CHGAP10645 AL161670.2-201ENST00000557650 1227 ntBASIC21.78■■□□□ 1.08
CHGAP10645 SYT17-208ENST00000568433 812 ntTSL 3 BASIC21.78■■□□□ 1.08
CHGAP10645 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC21.78■■□□□ 1.08
CHGAP10645 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC21.78■■□□□ 1.08
CHGAP10645 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHGAP10645 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC21.78■■□□□ 1.08
CHGAP10645 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.78■■□□□ 1.08
CHGAP10645 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC21.78■■□□□ 1.08
CHGAP10645 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHGAP10645 SLC9A7P1-202ENST00000556476 2239 ntBASIC21.78■■□□□ 1.08
CHGAP10645 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC21.77■■□□□ 1.08
CHGAP10645 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC21.77■■□□□ 1.08
CHGAP10645 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGAP10645 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGAP10645 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
CHGAP10645 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CHGAP10645 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC21.77■■□□□ 1.08
CHGAP10645 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGAP10645 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHGAP10645 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHGAP10645 RPL18P13-201ENST00000478088 569 ntBASIC21.77■■□□□ 1.08
CHGAP10645 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
CHGAP10645 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGAP10645 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC21.77■■□□□ 1.08
CHGAP10645 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHGAP10645 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGAP10645 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHGAP10645 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC21.77■■□□□ 1.08
CHGAP10645 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC21.77■■□□□ 1.08
CHGAP10645 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHGAP10645 AC006480.2-201ENST00000609770 1337 ntBASIC21.77■■□□□ 1.07
CHGAP10645 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CHGAP10645 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.07
CHGAP10645 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC21.77■■□□□ 1.07
CHGAP10645 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
CHGAP10645 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHGAP10645 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CHGAP10645 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGAP10645 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGAP10645 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGAP10645 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGAP10645 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC21.76■■□□□ 1.07
CHGAP10645 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CHGAP10645 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGAP10645 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGAP10645 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms