Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
RARAP10276 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RARAP10276 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RARAP10276 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RARAP10276 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.04■□□□□ 0.16
RARAP10276 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RARAP10276 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RARAP10276 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.04■□□□□ 0.16
RARAP10276 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
RARAP10276 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.04■□□□□ 0.16
RARAP10276 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
RARAP10276 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.04■□□□□ 0.16
RARAP10276 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.04■□□□□ 0.16
RARAP10276 DOC2GP-202ENST00000514950 1163 ntBASIC16.04■□□□□ 0.16
RARAP10276 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.04■□□□□ 0.16
RARAP10276 AC023310.3-201ENST00000557027 670 ntBASIC16.04■□□□□ 0.16
RARAP10276 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.04■□□□□ 0.16
RARAP10276 AC100756.1-201ENST00000562736 682 ntBASIC16.04■□□□□ 0.16
RARAP10276 RARRES2P5-201ENST00000564013 466 ntBASIC16.04■□□□□ 0.16
RARAP10276 AC138749.3-201ENST00000567691 622 ntBASIC16.04■□□□□ 0.16
RARAP10276 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.04■□□□□ 0.16
RARAP10276 AC116165.1-201ENST00000611806 668 ntBASIC16.04■□□□□ 0.16
RARAP10276 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.04■□□□□ 0.16
RARAP10276 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 INTS4P1-203ENST00000641008 3683 ntBASIC16.04■□□□□ 0.16
RARAP10276 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RARAP10276 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
RARAP10276 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RARAP10276 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.04■□□□□ 0.16
RARAP10276 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RARAP10276 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 AC012508.2-201ENST00000567613 1472 ntBASIC16.03■□□□□ 0.16
RARAP10276 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RARAP10276 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.03■□□□□ 0.16
RARAP10276 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
RARAP10276 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 SPDYE19P-201ENST00000338590 713 ntBASIC16.03■□□□□ 0.16
RARAP10276 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.03■□□□□ 0.16
RARAP10276 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.03■□□□□ 0.16
RARAP10276 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.03■□□□□ 0.16
RARAP10276 UGT1A2P-201ENST00000454886 866 ntBASIC16.03■□□□□ 0.16
RARAP10276 GAPDHP40-201ENST00000505218 1006 ntBASIC16.03■□□□□ 0.16
RARAP10276 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
RARAP10276 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.03■□□□□ 0.16
RARAP10276 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RARAP10276 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.03■□□□□ 0.16
RARAP10276 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.03■□□□□ 0.16
RARAP10276 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
RARAP10276 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RARAP10276 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms