Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VSIG8P0DPA2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.17□□□□□ -0.3
VSIG8P0DPA2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 RN7SKP199-201ENST00000410325 305 ntBASIC13.17□□□□□ -0.3
VSIG8P0DPA2 KRT18P32-201ENST00000424695 1287 ntBASIC13.17□□□□□ -0.3
VSIG8P0DPA2 AC004832.2-201ENST00000426397 482 ntBASIC13.17□□□□□ -0.3
VSIG8P0DPA2 KRT18P64-201ENST00000434946 1219 ntBASIC13.17□□□□□ -0.3
VSIG8P0DPA2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 AC025181.2-201ENST00000606994 802 ntBASIC13.17□□□□□ -0.3
VSIG8P0DPA2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 AL035456.1-201ENST00000456064 1369 ntBASIC13.17□□□□□ -0.3
VSIG8P0DPA2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 Z97205.2-201ENST00000564697 1639 ntBASIC13.17□□□□□ -0.3
VSIG8P0DPA2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.17□□□□□ -0.3
VSIG8P0DPA2 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 MTND6P24-201ENST00000440466 518 ntBASIC13.16□□□□□ -0.3
VSIG8P0DPA2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.16□□□□□ -0.3
VSIG8P0DPA2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms