Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 AC004987.2-201ENST00000395959 1148 ntBASIC11.48□□□□□ -0.57
SMIM17P0DL12 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 AC018712.1-201ENST00000455767 687 ntBASIC11.48□□□□□ -0.57
SMIM17P0DL12 AC098859.1-201ENST00000502915 1238 ntBASIC11.48□□□□□ -0.57
SMIM17P0DL12 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 AL121912.1-201ENST00000603683 238 ntBASIC11.48□□□□□ -0.57
SMIM17P0DL12 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 KRT8P44-201ENST00000441609 1350 ntBASIC11.48□□□□□ -0.57
SMIM17P0DL12 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 AC006504.5-208ENST00000588784 2401 ntBASIC11.48□□□□□ -0.57
SMIM17P0DL12 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM17P0DL12 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM17P0DL12 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 AL691432.1-201ENST00000596308 1422 ntBASIC11.47□□□□□ -0.57
SMIM17P0DL12 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 HNRNPDP1-201ENST00000439535 754 ntBASIC11.47□□□□□ -0.57
SMIM17P0DL12 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 AC010507.1-201ENST00000633895 436 ntBASIC11.47□□□□□ -0.57
SMIM17P0DL12 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM17P0DL12 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM17P0DL12 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms