Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.86□□□□□ -0.19
FREM3P0C091 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.86□□□□□ -0.19
FREM3P0C091 FAM21FP-201ENST00000426241 1131 ntBASIC13.86□□□□□ -0.19
FREM3P0C091 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 AC244107.1-201ENST00000442033 332 ntBASIC13.86□□□□□ -0.19
FREM3P0C091 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
FREM3P0C091 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.86□□□□□ -0.19
FREM3P0C091 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.86□□□□□ -0.19
FREM3P0C091 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.86□□□□□ -0.19
FREM3P0C091 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.86□□□□□ -0.19
FREM3P0C091 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
FREM3P0C091 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
FREM3P0C091 AC023024.2-201ENST00000623561 1993 ntBASIC13.86□□□□□ -0.19
FREM3P0C091 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
FREM3P0C091 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
FREM3P0C091 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
FREM3P0C091 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.86□□□□□ -0.19
FREM3P0C091 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
FREM3P0C091 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 LRRC59-203ENST00000576448 1531 ntBASIC13.86□□□□□ -0.19
FREM3P0C091 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.85□□□□□ -0.19
FREM3P0C091 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
FREM3P0C091 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
FREM3P0C091 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.85□□□□□ -0.19
FREM3P0C091 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.85□□□□□ -0.19
FREM3P0C091 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.85□□□□□ -0.19
FREM3P0C091 KRT18P25-201ENST00000508931 1278 ntBASIC13.85□□□□□ -0.19
FREM3P0C091 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
FREM3P0C091 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
FREM3P0C091 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
FREM3P0C091 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.85□□□□□ -0.19
FREM3P0C091 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 KRT8P14-201ENST00000414254 1442 ntBASIC13.85□□□□□ -0.19
FREM3P0C091 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.85□□□□□ -0.19
FREM3P0C091 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.85□□□□□ -0.19
FREM3P0C091 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.85□□□□□ -0.19
FREM3P0C091 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
FREM3P0C091 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.85□□□□□ -0.19
FREM3P0C091 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
FREM3P0C091 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.85□□□□□ -0.19
FREM3P0C091 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.85□□□□□ -0.19
FREM3P0C091 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
FREM3P0C091 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.85□□□□□ -0.19
FREM3P0C091 BTNL10-201ENST00000595971 695 ntBASIC13.85□□□□□ -0.19
FREM3P0C091 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.85□□□□□ -0.19
FREM3P0C091 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.85□□□□□ -0.19
FREM3P0C091 AP000845.1-201ENST00000581677 2131 ntBASIC13.85□□□□□ -0.19
FREM3P0C091 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.85□□□□□ -0.19
FREM3P0C091 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
FREM3P0C091 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.85□□□□□ -0.19
FREM3P0C091 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.84□□□□□ -0.19
FREM3P0C091 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
FREM3P0C091 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 AC007787.1-201ENST00000588095 1583 ntBASIC13.84□□□□□ -0.19
FREM3P0C091 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
FREM3P0C091 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
FREM3P0C091 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
FREM3P0C091 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.84□□□□□ -0.19
FREM3P0C091 PRSS30P-206ENST00000641773 873 ntBASIC13.84□□□□□ -0.19
FREM3P0C091 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
FREM3P0C091 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.84□□□□□ -0.19
FREM3P0C091 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
FREM3P0C091 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
FREM3P0C091 AL138799.1-201ENST00000448213 1675 ntBASIC13.84□□□□□ -0.19
FREM3P0C091 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.84□□□□□ -0.19
FREM3P0C091 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms