Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 GRK6P1-201ENST00000400595 1711 ntBASIC15.09■□□□□ 0.01
RBP1P09455 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 AC018529.2-202ENST00000611482 3087 ntBASIC15.09■□□□□ 0.01
RBP1P09455 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.09■□□□□ 0.01
RBP1P09455 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 AL359258.3-201ENST00000622910 2331 ntBASIC15.09■□□□□ 0.01
RBP1P09455 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RBP1P09455 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 MTHFR-210ENST00000641407 2387 ntBASIC15.09■□□□□ 0.01
RBP1P09455 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.09■□□□□ 0.01
RBP1P09455 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.09■□□□□ 0.01
RBP1P09455 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RBP1P09455 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.09■□□□□ 0.01
RBP1P09455 KLF2P3-201ENST00000451977 1087 ntBASIC15.09■□□□□ 0.01
RBP1P09455 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.09■□□□□ 0.01
RBP1P09455 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.09■□□□□ 0.01
RBP1P09455 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.09■□□□□ 0.01
RBP1P09455 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.09■□□□□ 0.01
RBP1P09455 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
RBP1P09455 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.09■□□□□ 0.01
RBP1P09455 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RBP1P09455 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.09■□□□□ 0.01
RBP1P09455 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 AC140878.1-201ENST00000565277 250 ntBASIC15.09■□□□□ 0.01
RBP1P09455 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.09■□□□□ 0.01
RBP1P09455 AC015911.4-201ENST00000588022 1070 ntBASIC15.09■□□□□ 0.01
RBP1P09455 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.09■□□□□ 0.01
RBP1P09455 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.09■□□□□ 0.01
RBP1P09455 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.09■□□□□ 0.01
RBP1P09455 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.09■□□□□ 0.01
RBP1P09455 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.09■□□□□ 0.01
RBP1P09455 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
RBP1P09455 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.09■□□□□ 0.01
RBP1P09455 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.09■□□□□ 0.01
RBP1P09455 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RBP1P09455 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RBP1P09455 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RBP1P09455 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.08■□□□□ 0.01
RBP1P09455 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RBP1P09455 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.08■□□□□ 0.01
RBP1P09455 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RBP1P09455 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.08■□□□□ 0.01
RBP1P09455 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.08■□□□□ 0.01
RBP1P09455 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
RBP1P09455 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RBP1P09455 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.08■□□□□ 0.01
RBP1P09455 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.08■□□□□ 0.01
RBP1P09455 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RBP1P09455 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
RBP1P09455 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.08■□□□□ 0.01
RBP1P09455 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.08■□□□□ 0.01
RBP1P09455 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RBP1P09455 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.08■□□□□ 0
RBP1P09455 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.08■□□□□ 0
RBP1P09455 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RBP1P09455 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.08■□□□□ 0
RBP1P09455 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RBP1P09455 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RBP1P09455 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.08■□□□□ 0
RBP1P09455 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.08■□□□□ 0
RBP1P09455 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.08■□□□□ 0
RBP1P09455 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.08■□□□□ 0
RBP1P09455 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.08■□□□□ 0
RBP1P09455 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.08■□□□□ 0
RBP1P09455 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RBP1P09455 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.08■□□□□ 0
RBP1P09455 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.08■□□□□ 0
RBP1P09455 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.08■□□□□ 0
RBP1P09455 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.08■□□□□ 0
RBP1P09455 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.08■□□□□ 0
RBP1P09455 AC044860.1-202ENST00000559481 777 ntBASIC15.08■□□□□ 0
RBP1P09455 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.08■□□□□ 0
RBP1P09455 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.08■□□□□ 0
RBP1P09455 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.08■□□□□ 0
RBP1P09455 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RBP1P09455 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.08■□□□□ 0
RBP1P09455 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.08■□□□□ 0
RBP1P09455 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.08■□□□□ 0
RBP1P09455 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RBP1P09455 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.08■□□□□ 0
RBP1P09455 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
RBP1P09455 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.08■□□□□ 0
RBP1P09455 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.08■□□□□ 0
RBP1P09455 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.07■□□□□ 0
RBP1P09455 AC113367.3-201ENST00000508316 1912 ntBASIC15.07■□□□□ 0
RBP1P09455 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBP1P09455 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBP1P09455 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.07■□□□□ 0
RBP1P09455 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RBP1P09455 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RBP1P09455 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms