Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.02■□□□□ 0.16
ERBB2P04626 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.02■□□□□ 0.16
ERBB2P04626 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 AC068587.6-202ENST00000641839 5619 ntBASIC16.02■□□□□ 0.16
ERBB2P04626 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.02■□□□□ 0.16
ERBB2P04626 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.02■□□□□ 0.16
ERBB2P04626 AC106881.1-201ENST00000605849 3329 ntBASIC16.02■□□□□ 0.16
ERBB2P04626 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 LINC01101-201ENST00000622953 1884 ntBASIC16.02■□□□□ 0.16
ERBB2P04626 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 NORAD-201ENST00000565493 5339 ntBASIC16.02■□□□□ 0.16
ERBB2P04626 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ERBB2P04626 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.02■□□□□ 0.16
ERBB2P04626 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.02■□□□□ 0.16
ERBB2P04626 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.02■□□□□ 0.16
ERBB2P04626 AL596325.1-201ENST00000563991 1082 ntBASIC16.02■□□□□ 0.16
ERBB2P04626 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.02■□□□□ 0.16
ERBB2P04626 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ERBB2P04626 AP005019.2-201ENST00000615104 511 ntBASIC16.02■□□□□ 0.16
ERBB2P04626 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ERBB2P04626 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.02■□□□□ 0.16
ERBB2P04626 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERBB2P04626 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.02■□□□□ 0.16
ERBB2P04626 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERBB2P04626 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.02■□□□□ 0.15
ERBB2P04626 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.02■□□□□ 0.15
ERBB2P04626 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERBB2P04626 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERBB2P04626 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.02■□□□□ 0.15
ERBB2P04626 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ERBB2P04626 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERBB2P04626 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERBB2P04626 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERBB2P04626 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERBB2P04626 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ERBB2P04626 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
ERBB2P04626 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
ERBB2P04626 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.02■□□□□ 0.15
ERBB2P04626 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
ERBB2P04626 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.01■□□□□ 0.15
ERBB2P04626 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.01■□□□□ 0.15
ERBB2P04626 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ERBB2P04626 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
ERBB2P04626 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
ERBB2P04626 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 AC098614.1-201ENST00000368528 745 ntBASIC16.01■□□□□ 0.15
ERBB2P04626 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.01■□□□□ 0.15
ERBB2P04626 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ERBB2P04626 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.01■□□□□ 0.15
ERBB2P04626 AC114812.1-204ENST00000449669 728 ntBASIC16.01■□□□□ 0.15
ERBB2P04626 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.01■□□□□ 0.15
ERBB2P04626 RN7SL837P-201ENST00000463010 287 ntBASIC16.01■□□□□ 0.15
ERBB2P04626 RN7SL752P-201ENST00000463779 287 ntBASIC16.01■□□□□ 0.15
ERBB2P04626 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.01■□□□□ 0.15
ERBB2P04626 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
ERBB2P04626 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.01■□□□□ 0.15
ERBB2P04626 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.01■□□□□ 0.15
ERBB2P04626 MIR5189-201ENST00000577370 114 ntBASIC16.01■□□□□ 0.15
ERBB2P04626 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.01■□□□□ 0.15
ERBB2P04626 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.01■□□□□ 0.15
ERBB2P04626 AC010319.3-201ENST00000597028 470 ntBASIC16.01■□□□□ 0.15
ERBB2P04626 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ERBB2P04626 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.01■□□□□ 0.15
ERBB2P04626 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.01■□□□□ 0.15
ERBB2P04626 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
ERBB2P04626 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.01■□□□□ 0.15
ERBB2P04626 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.01■□□□□ 0.15
ERBB2P04626 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.01■□□□□ 0.15
ERBB2P04626 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
ERBB2P04626 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ERBB2P04626 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.01■□□□□ 0.15
ERBB2P04626 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16■□□□□ 0.15
ERBB2P04626 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16■□□□□ 0.15
ERBB2P04626 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ERBB2P04626 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16■□□□□ 0.15
ERBB2P04626 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16■□□□□ 0.15
ERBB2P04626 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms