Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
APOA1P02647 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.7□□□□□ -0.22
APOA1P02647 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
APOA1P02647 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
APOA1P02647 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
APOA1P02647 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.7□□□□□ -0.22
APOA1P02647 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
APOA1P02647 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
APOA1P02647 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.7□□□□□ -0.22
APOA1P02647 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.7□□□□□ -0.22
APOA1P02647 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.7□□□□□ -0.22
APOA1P02647 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.7□□□□□ -0.22
APOA1P02647 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.7□□□□□ -0.22
APOA1P02647 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
APOA1P02647 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.7□□□□□ -0.22
APOA1P02647 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.7□□□□□ -0.22
APOA1P02647 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
APOA1P02647 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.7□□□□□ -0.22
APOA1P02647 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
APOA1P02647 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.7□□□□□ -0.22
APOA1P02647 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 AC018892.3-201ENST00000623986 2499 ntBASIC13.7□□□□□ -0.22
APOA1P02647 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.7□□□□□ -0.22
APOA1P02647 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
APOA1P02647 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.7□□□□□ -0.22
APOA1P02647 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA1P02647 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.69□□□□□ -0.22
APOA1P02647 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 PTPRVP-205ENST00000641549 5067 ntBASIC13.69□□□□□ -0.22
APOA1P02647 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
APOA1P02647 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
APOA1P02647 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.69□□□□□ -0.22
APOA1P02647 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.69□□□□□ -0.22
APOA1P02647 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.69□□□□□ -0.22
APOA1P02647 HMGA1P7-201ENST00000406908 502 ntBASIC13.69□□□□□ -0.22
APOA1P02647 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
APOA1P02647 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.69□□□□□ -0.22
APOA1P02647 DUX4L26-201ENST00000489078 1255 ntBASIC13.69□□□□□ -0.22
APOA1P02647 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.69□□□□□ -0.22
APOA1P02647 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.69□□□□□ -0.22
APOA1P02647 MTDHP3-201ENST00000594186 672 ntBASIC13.69□□□□□ -0.22
APOA1P02647 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.69□□□□□ -0.22
APOA1P02647 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
APOA1P02647 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
APOA1P02647 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
APOA1P02647 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.69□□□□□ -0.22
APOA1P02647 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA1P02647 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms