Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SPTA1P02549 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
SPTA1P02549 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.79□□□□□ -0.2
SPTA1P02549 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPTA1P02549 HLA-J-204ENST00000495278 958 ntBASIC13.79□□□□□ -0.2
SPTA1P02549 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.79□□□□□ -0.2
SPTA1P02549 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.79□□□□□ -0.2
SPTA1P02549 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.79□□□□□ -0.2
SPTA1P02549 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.79□□□□□ -0.2
SPTA1P02549 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.78□□□□□ -0.2
SPTA1P02549 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.78□□□□□ -0.2
SPTA1P02549 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.78□□□□□ -0.2
SPTA1P02549 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.78□□□□□ -0.2
SPTA1P02549 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SPTA1P02549 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
SPTA1P02549 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.78□□□□□ -0.2
SPTA1P02549 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 AC078875.1-201ENST00000431907 724 ntBASIC13.78□□□□□ -0.2
SPTA1P02549 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.78□□□□□ -0.2
SPTA1P02549 AC005740.2-201ENST00000511085 419 ntBASIC13.78□□□□□ -0.2
SPTA1P02549 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.78□□□□□ -0.2
SPTA1P02549 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SPTA1P02549 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.78□□□□□ -0.2
SPTA1P02549 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.78□□□□□ -0.2
SPTA1P02549 AL162426.1-201ENST00000624141 743 ntBASIC13.78□□□□□ -0.2
SPTA1P02549 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 AL645608.8-201ENST00000606034 2086 ntBASIC13.78□□□□□ -0.2
SPTA1P02549 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SPTA1P02549 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SPTA1P02549 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
SPTA1P02549 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.78□□□□□ -0.2
SPTA1P02549 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SPTA1P02549 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.78□□□□□ -0.2
SPTA1P02549 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 RN7SL67P-201ENST00000492147 296 ntBASIC13.78□□□□□ -0.2
SPTA1P02549 SCARNA21-201ENST00000517026 139 ntBASIC13.78□□□□□ -0.2
SPTA1P02549 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.78□□□□□ -0.2
SPTA1P02549 C2orf69P1-201ENST00000563532 1093 ntBASIC13.78□□□□□ -0.2
SPTA1P02549 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SPTA1P02549 AC105137.3-201ENST00000617588 984 ntBASIC13.78□□□□□ -0.2
SPTA1P02549 AC007718.1-201ENST00000621078 280 ntBASIC13.78□□□□□ -0.2
SPTA1P02549 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.2
SPTA1P02549 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SPTA1P02549 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SPTA1P02549 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SPTA1P02549 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SPTA1P02549 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SPTA1P02549 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SPTA1P02549 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SPTA1P02549 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPTA1P02549 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SPTA1P02549 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPTA1P02549 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPTA1P02549 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.77□□□□□ -0.21
SPTA1P02549 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.77□□□□□ -0.21
SPTA1P02549 FAM86KP-201ENST00000509817 987 ntBASIC13.77□□□□□ -0.21
SPTA1P02549 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.77□□□□□ -0.21
SPTA1P02549 DNM1P51-201ENST00000558149 522 ntBASIC13.77□□□□□ -0.21
SPTA1P02549 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.77□□□□□ -0.21
SPTA1P02549 OR10B1P-201ENST00000601666 907 ntBASIC13.77□□□□□ -0.21
SPTA1P02549 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SPTA1P02549 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
SPTA1P02549 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPTA1P02549 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPTA1P02549 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPTA1P02549 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.77□□□□□ -0.21
SPTA1P02549 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPTA1P02549 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SPTA1P02549 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SPTA1P02549 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SPTA1P02549 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPTA1P02549 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SPTA1P02549 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
SPTA1P02549 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SPTA1P02549 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SPTA1P02549 RCC2P8-201ENST00000502779 1035 ntBASIC13.76□□□□□ -0.21
SPTA1P02549 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.76□□□□□ -0.21
SPTA1P02549 MIR4313-201ENST00000580760 101 ntBASIC13.76□□□□□ -0.21
SPTA1P02549 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.76□□□□□ -0.21
SPTA1P02549 AC092171.5-201ENST00000608012 942 ntBASIC13.76□□□□□ -0.21
SPTA1P02549 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms