Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFP01375 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFP01375 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TNFP01375 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.84□□□□□ -0.03
TNFP01375 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFP01375 AC007969.1-201ENST00000433675 447 ntBASIC14.84□□□□□ -0.03
TNFP01375 AC006033.1-201ENST00000440505 426 ntBASIC14.84□□□□□ -0.03
TNFP01375 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.84□□□□□ -0.03
TNFP01375 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.84□□□□□ -0.03
TNFP01375 AC026434.2-201ENST00000506094 1078 ntBASIC14.84□□□□□ -0.03
TNFP01375 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFP01375 AC106820.3-201ENST00000561653 397 ntBASIC14.84□□□□□ -0.03
TNFP01375 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.84□□□□□ -0.03
TNFP01375 AC103810.3-201ENST00000583567 96 ntBASIC14.84□□□□□ -0.03
TNFP01375 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 ZACNP1-201ENST00000612259 710 ntBASIC14.84□□□□□ -0.03
TNFP01375 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.84□□□□□ -0.03
TNFP01375 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TNFP01375 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TNFP01375 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TNFP01375 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TNFP01375 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TNFP01375 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.84□□□□□ -0.03
TNFP01375 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 MST1L-201ENST00000442552 2185 ntBASIC14.84□□□□□ -0.03
TNFP01375 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.84□□□□□ -0.03
TNFP01375 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TNFP01375 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TNFP01375 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
TNFP01375 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TNFP01375 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TNFP01375 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.83□□□□□ -0.03
TNFP01375 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.83□□□□□ -0.03
TNFP01375 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.83□□□□□ -0.03
TNFP01375 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TNFP01375 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFP01375 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFP01375 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFP01375 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFP01375 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFP01375 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFP01375 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFP01375 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFP01375 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.83□□□□□ -0.04
TNFP01375 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFP01375 AC099548.2-209ENST00000480264 625 ntBASIC14.83□□□□□ -0.04
TNFP01375 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFP01375 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFP01375 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TNFP01375 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.83□□□□□ -0.04
TNFP01375 AC104982.3-201ENST00000581995 514 ntBASIC14.83□□□□□ -0.04
TNFP01375 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFP01375 AC004466.1-201ENST00000599515 1080 ntBASIC14.83□□□□□ -0.04
TNFP01375 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TNFP01375 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFP01375 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TNFP01375 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFP01375 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFP01375 FKBP4P6-201ENST00000457486 1332 ntBASIC14.83□□□□□ -0.04
TNFP01375 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TNFP01375 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFP01375 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.83□□□□□ -0.04
TNFP01375 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFP01375 AL023775.1-201ENST00000454907 1746 ntBASIC14.83□□□□□ -0.04
TNFP01375 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.83□□□□□ -0.04
TNFP01375 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TNFP01375 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TNFP01375 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFP01375 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFP01375 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFP01375 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFP01375 KRT8P4-201ENST00000509735 1454 ntBASIC14.82□□□□□ -0.04
TNFP01375 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFP01375 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms