Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.3□□□□□ -0.44
CRLF1O75462 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
CRLF1O75462 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 C8orf49-201ENST00000525043 1968 ntBASIC12.3□□□□□ -0.44
CRLF1O75462 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CRLF1O75462 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.3□□□□□ -0.44
CRLF1O75462 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CRLF1O75462 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CRLF1O75462 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.3□□□□□ -0.44
CRLF1O75462 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CRLF1O75462 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.29□□□□□ -0.44
CRLF1O75462 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.29□□□□□ -0.44
CRLF1O75462 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.29□□□□□ -0.44
CRLF1O75462 AC073150.1-201ENST00000450406 1084 ntBASIC12.29□□□□□ -0.44
CRLF1O75462 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.29□□□□□ -0.44
CRLF1O75462 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 MIR4649-201ENST00000582839 64 ntBASIC12.29□□□□□ -0.44
CRLF1O75462 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.29□□□□□ -0.44
CRLF1O75462 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.29□□□□□ -0.44
CRLF1O75462 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.29□□□□□ -0.44
CRLF1O75462 AL132994.2-201ENST00000603120 687 ntBASIC12.29□□□□□ -0.44
CRLF1O75462 RNF146-211ENST00000609447 607 ntTSL 4 BASIC12.29□□□□□ -0.44
CRLF1O75462 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.29□□□□□ -0.44
CRLF1O75462 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 MIR6842-201ENST00000612539 65 ntBASIC12.29□□□□□ -0.44
CRLF1O75462 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CRLF1O75462 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CRLF1O75462 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.29□□□□□ -0.44
CRLF1O75462 YRDCP1-201ENST00000621419 643 ntBASIC12.29□□□□□ -0.44
CRLF1O75462 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.29□□□□□ -0.44
CRLF1O75462 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.29□□□□□ -0.44
CRLF1O75462 AL603764.1-201ENST00000636452 321 ntBASIC12.29□□□□□ -0.44
CRLF1O75462 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CRLF1O75462 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CRLF1O75462 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.29□□□□□ -0.44
CRLF1O75462 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.29□□□□□ -0.44
CRLF1O75462 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.29□□□□□ -0.44
CRLF1O75462 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CRLF1O75462 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CRLF1O75462 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CRLF1O75462 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.29□□□□□ -0.44
CRLF1O75462 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
CRLF1O75462 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.29□□□□□ -0.44
CRLF1O75462 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CRLF1O75462 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
CRLF1O75462 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CRLF1O75462 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CRLF1O75462 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
CRLF1O75462 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CRLF1O75462 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CRLF1O75462 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.28□□□□□ -0.44
CRLF1O75462 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.28□□□□□ -0.44
CRLF1O75462 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
CRLF1O75462 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CRLF1O75462 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CRLF1O75462 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CRLF1O75462 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CRLF1O75462 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CRLF1O75462 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CRLF1O75462 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.28□□□□□ -0.44
CRLF1O75462 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms