Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH16O75309 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDH16O75309 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 AC011474.4-201ENST00000623523 2076 ntBASIC15.5■□□□□ 0.07
CDH16O75309 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
CDH16O75309 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH16O75309 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDH16O75309 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDH16O75309 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDH16O75309 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDH16O75309 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.49■□□□□ 0.07
CDH16O75309 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDH16O75309 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CDH16O75309 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDH16O75309 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH16O75309 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDH16O75309 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDH16O75309 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.49■□□□□ 0.07
CDH16O75309 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDH16O75309 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CDH16O75309 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.49■□□□□ 0.07
CDH16O75309 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDH16O75309 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.49■□□□□ 0.07
CDH16O75309 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH16O75309 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH16O75309 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH16O75309 SLED1-202ENST00000512051 380 ntBASIC15.49■□□□□ 0.07
CDH16O75309 SLC25A39P2-201ENST00000537614 270 ntBASIC15.49■□□□□ 0.07
CDH16O75309 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH16O75309 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.49■□□□□ 0.07
CDH16O75309 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH16O75309 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.49■□□□□ 0.07
CDH16O75309 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.49■□□□□ 0.07
CDH16O75309 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH16O75309 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH16O75309 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDH16O75309 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDH16O75309 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH16O75309 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH16O75309 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH16O75309 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH16O75309 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH16O75309 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH16O75309 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH16O75309 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CDH16O75309 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH16O75309 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CDH16O75309 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDH16O75309 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CDH16O75309 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.48■□□□□ 0.07
CDH16O75309 FAM58CP-201ENST00000435741 640 ntBASIC15.48■□□□□ 0.07
CDH16O75309 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH16O75309 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH16O75309 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH16O75309 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH16O75309 KRT8P48-201ENST00000515599 1220 ntBASIC15.48■□□□□ 0.07
CDH16O75309 BANF1P1-201ENST00000553684 263 ntBASIC15.48■□□□□ 0.07
CDH16O75309 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms