Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.31□□□□□ -0.28
PHF1O43189 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
PHF1O43189 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PHF1O43189 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PHF1O43189 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PHF1O43189 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PHF1O43189 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PHF1O43189 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PHF1O43189 AL691432.1-201ENST00000596308 1422 ntBASIC13.3□□□□□ -0.28
PHF1O43189 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.3□□□□□ -0.28
PHF1O43189 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.3□□□□□ -0.28
PHF1O43189 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
PHF1O43189 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
PHF1O43189 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
PHF1O43189 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PHF1O43189 BTBD7P1-201ENST00000447253 1453 ntBASIC13.3□□□□□ -0.28
PHF1O43189 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.3□□□□□ -0.28
PHF1O43189 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PHF1O43189 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.3□□□□□ -0.28
PHF1O43189 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.3□□□□□ -0.28
PHF1O43189 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PHF1O43189 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.3□□□□□ -0.28
PHF1O43189 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.3□□□□□ -0.28
PHF1O43189 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.3□□□□□ -0.28
PHF1O43189 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.3□□□□□ -0.28
PHF1O43189 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.3□□□□□ -0.28
PHF1O43189 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.3□□□□□ -0.28
PHF1O43189 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
PHF1O43189 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.3□□□□□ -0.28
PHF1O43189 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.3□□□□□ -0.28
PHF1O43189 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
PHF1O43189 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.3□□□□□ -0.28
PHF1O43189 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.3□□□□□ -0.28
PHF1O43189 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.3□□□□□ -0.28
PHF1O43189 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.3□□□□□ -0.28
PHF1O43189 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PHF1O43189 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
PHF1O43189 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PHF1O43189 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.29□□□□□ -0.28
PHF1O43189 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 AC091951.1-201ENST00000512854 2465 ntBASIC13.29□□□□□ -0.28
PHF1O43189 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.29□□□□□ -0.28
PHF1O43189 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.29□□□□□ -0.28
PHF1O43189 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.29□□□□□ -0.28
PHF1O43189 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PHF1O43189 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.29□□□□□ -0.28
PHF1O43189 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PHF1O43189 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PHF1O43189 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.29□□□□□ -0.28
PHF1O43189 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.29□□□□□ -0.28
PHF1O43189 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
PHF1O43189 AC243562.2-201ENST00000561247 970 ntBASIC13.29□□□□□ -0.28
PHF1O43189 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.29□□□□□ -0.28
PHF1O43189 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.29□□□□□ -0.28
PHF1O43189 MIR6775-201ENST00000617557 69 ntBASIC13.29□□□□□ -0.28
PHF1O43189 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.29□□□□□ -0.28
PHF1O43189 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.29□□□□□ -0.28
PHF1O43189 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms