Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
UPK2O00526 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
UPK2O00526 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.29□□□□□ -0.44
UPK2O00526 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.29□□□□□ -0.44
UPK2O00526 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.29□□□□□ -0.44
UPK2O00526 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
UPK2O00526 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.29□□□□□ -0.44
UPK2O00526 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
UPK2O00526 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.29□□□□□ -0.44
UPK2O00526 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.29□□□□□ -0.44
UPK2O00526 AC067863.1-201ENST00000494933 530 ntBASIC12.29□□□□□ -0.44
UPK2O00526 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.29□□□□□ -0.44
UPK2O00526 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.29□□□□□ -0.44
UPK2O00526 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
UPK2O00526 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.29□□□□□ -0.44
UPK2O00526 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.29□□□□□ -0.44
UPK2O00526 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
UPK2O00526 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.29□□□□□ -0.44
UPK2O00526 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.29□□□□□ -0.44
UPK2O00526 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.29□□□□□ -0.44
UPK2O00526 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.29□□□□□ -0.44
UPK2O00526 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.29□□□□□ -0.44
UPK2O00526 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.29□□□□□ -0.44
UPK2O00526 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.29□□□□□ -0.44
UPK2O00526 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.29□□□□□ -0.44
UPK2O00526 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.29□□□□□ -0.44
UPK2O00526 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.29□□□□□ -0.44
UPK2O00526 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
UPK2O00526 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
UPK2O00526 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.29□□□□□ -0.44
UPK2O00526 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.29□□□□□ -0.44
UPK2O00526 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 MTHFR-210ENST00000641407 2387 ntBASIC12.28□□□□□ -0.44
UPK2O00526 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 AC018529.2-202ENST00000611482 3087 ntBASIC12.28□□□□□ -0.44
UPK2O00526 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 AC092580.3-201ENST00000430932 139 ntBASIC12.28□□□□□ -0.44
UPK2O00526 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.28□□□□□ -0.44
UPK2O00526 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.28□□□□□ -0.44
UPK2O00526 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.28□□□□□ -0.44
UPK2O00526 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 AC092337.1-201ENST00000568699 1129 ntBASIC12.28□□□□□ -0.44
UPK2O00526 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
UPK2O00526 AL158211.3-201ENST00000607385 239 ntBASIC12.28□□□□□ -0.44
UPK2O00526 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.28□□□□□ -0.44
UPK2O00526 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
UPK2O00526 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 AL360270.3-201ENST00000609118 1348 ntBASIC12.28□□□□□ -0.44
UPK2O00526 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.28□□□□□ -0.44
UPK2O00526 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms