Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1AO00322 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1AO00322 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1AO00322 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.5□□□□□ -0.09
UPK1AO00322 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.49□□□□□ -0.09
UPK1AO00322 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1AO00322 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1AO00322 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1AO00322 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 AC104794.3-201ENST00000566840 1248 ntBASIC14.49□□□□□ -0.09
UPK1AO00322 AC011467.4-201ENST00000594891 528 ntBASIC14.49□□□□□ -0.09
UPK1AO00322 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1AO00322 AC004790.1-201ENST00000612686 536 ntBASIC14.49□□□□□ -0.09
UPK1AO00322 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.49□□□□□ -0.09
UPK1AO00322 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1AO00322 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1AO00322 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1AO00322 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1AO00322 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1AO00322 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
UPK1AO00322 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1AO00322 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
UPK1AO00322 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.48□□□□□ -0.09
UPK1AO00322 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
UPK1AO00322 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
UPK1AO00322 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.48□□□□□ -0.09
UPK1AO00322 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 GHSR-202ENST00000427970 912 ntBASIC14.48□□□□□ -0.09
UPK1AO00322 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.48□□□□□ -0.09
UPK1AO00322 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.48□□□□□ -0.09
UPK1AO00322 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.48□□□□□ -0.09
UPK1AO00322 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 AC027796.2-201ENST00000575326 344 ntBASIC14.48□□□□□ -0.09
UPK1AO00322 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.48□□□□□ -0.09
UPK1AO00322 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.48□□□□□ -0.09
UPK1AO00322 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.48□□□□□ -0.09
UPK1AO00322 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.48□□□□□ -0.09
UPK1AO00322 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.48□□□□□ -0.09
UPK1AO00322 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.48□□□□□ -0.09
UPK1AO00322 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.48□□□□□ -0.09
UPK1AO00322 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
UPK1AO00322 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
UPK1AO00322 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
UPK1AO00322 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
UPK1AO00322 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
UPK1AO00322 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1AO00322 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms