Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 FRMPD2B-201ENST00000431305 1347 ntBASIC20.31■□□□□ 0.84
SBNO1A3KN83 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 SOD2-202ENST00000367054 815 ntTSL 2 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 NCR3-202ENST00000376071 541 ntTSL 5 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 AC026320.2-201ENST00000434379 478 ntBASIC20.31■□□□□ 0.84
SBNO1A3KN83 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 AC008723.1-201ENST00000506922 207 ntBASIC20.31■□□□□ 0.84
SBNO1A3KN83 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC20.31■□□□□ 0.84
SBNO1A3KN83 AL365203.3-201ENST00000609742 2057 ntBASIC20.31■□□□□ 0.84
SBNO1A3KN83 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SBNO1A3KN83 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 AC090340.1-201ENST00000620778 4980 ntBASIC20.3■□□□□ 0.84
SBNO1A3KN83 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 SLC9A7P1-202ENST00000556476 2239 ntBASIC20.3■□□□□ 0.84
SBNO1A3KN83 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 SKA2-202ENST00000437036 625 ntTSL 2 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 AL645933.1-201ENST00000440087 609 ntBASIC20.3■□□□□ 0.84
SBNO1A3KN83 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.3■□□□□ 0.84
SBNO1A3KN83 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SBNO1A3KN83 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SBNO1A3KN83 CICP11-201ENST00000434745 2827 ntBASIC20.29■□□□□ 0.84
SBNO1A3KN83 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SBNO1A3KN83 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SBNO1A3KN83 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.29■□□□□ 0.84
SBNO1A3KN83 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SBNO1A3KN83 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC20.29■□□□□ 0.84
SBNO1A3KN83 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SBNO1A3KN83 AL512430.1-201ENST00000392575 860 ntBASIC20.29■□□□□ 0.84
SBNO1A3KN83 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SBNO1A3KN83 RPL18AP3-201ENST00000462885 528 ntBASIC20.29■□□□□ 0.84
SBNO1A3KN83 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SBNO1A3KN83 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.29■□□□□ 0.84
SBNO1A3KN83 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SBNO1A3KN83 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC20.29■□□□□ 0.84
SBNO1A3KN83 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC20.29■□□□□ 0.84
SBNO1A3KN83 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.29■□□□□ 0.84
SBNO1A3KN83 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SBNO1A3KN83 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SBNO1A3KN83 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SBNO1A3KN83 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SBNO1A3KN83 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SBNO1A3KN83 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SBNO1A3KN83 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SBNO1A3KN83 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SBNO1A3KN83 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SBNO1A3KN83 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.28■□□□□ 0.84
SBNO1A3KN83 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SBNO1A3KN83 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC20.28■□□□□ 0.84
SBNO1A3KN83 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.28■□□□□ 0.84
SBNO1A3KN83 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SBNO1A3KN83 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.28■□□□□ 0.84
SBNO1A3KN83 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SBNO1A3KN83 MIR557-201ENST00000385239 98 ntBASIC20.28■□□□□ 0.84
SBNO1A3KN83 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SBNO1A3KN83 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SBNO1A3KN83 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SBNO1A3KN83 AC079112.1-201ENST00000454972 939 ntBASIC20.28■□□□□ 0.84
SBNO1A3KN83 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC20.28■□□□□ 0.84
SBNO1A3KN83 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SBNO1A3KN83 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC20.28■□□□□ 0.84
SBNO1A3KN83 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC20.28■□□□□ 0.84
SBNO1A3KN83 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms