Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 BEND3P1-201ENST00000421591 1944 ntBASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB4X5D2U9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 MROH4P-201ENST00000431302 1578 ntBASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AC084364.1-201ENST00000551967 1556 ntBASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 KRT18P64-201ENST00000434946 1219 ntBASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AC092337.1-201ENST00000568699 1129 ntBASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AL390955.2-201ENST00000603032 514 ntBASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AF228730.6-201ENST00000641497 218 ntBASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AC084121.3-201ENST00000641716 218 ntBASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DRB4X5D2U9 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
HLA-DRB4X5D2U9 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
HLA-DRB4X5D2U9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
HLA-DRB4X5D2U9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.58□□□□□ -0.55
HLA-DRB4X5D2U9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.55
HLA-DRB4X5D2U9 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 C18orf15-201ENST00000623680 2534 ntBASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.58□□□□□ -0.56
HLA-DRB4X5D2U9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms