Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLIC4Q9Y696 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.44■□□□□ 0.38
CLIC4Q9Y696 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 AL158070.2-201ENST00000623713 1621 ntBASIC17.43■□□□□ 0.38
CLIC4Q9Y696 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 AC117489.1-201ENST00000625169 3217 ntBASIC17.43■□□□□ 0.38
CLIC4Q9Y696 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 SPDYE19P-201ENST00000338590 713 ntBASIC17.43■□□□□ 0.38
CLIC4Q9Y696 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 AL353779.1-201ENST00000434793 351 ntBASIC17.43■□□□□ 0.38
CLIC4Q9Y696 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 AL512638.1-201ENST00000457493 794 ntBASIC17.43■□□□□ 0.38
CLIC4Q9Y696 VDAC1P7-201ENST00000462417 847 ntBASIC17.43■□□□□ 0.38
CLIC4Q9Y696 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 AC093214.1-201ENST00000511688 1107 ntBASIC17.43■□□□□ 0.38
CLIC4Q9Y696 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 AL049840.4-201ENST00000602422 811 ntBASIC17.43■□□□□ 0.38
CLIC4Q9Y696 MIR8072-201ENST00000614241 80 ntBASIC17.43■□□□□ 0.38
CLIC4Q9Y696 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 AC113367.3-201ENST00000508316 1912 ntBASIC17.43■□□□□ 0.38
CLIC4Q9Y696 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIC4Q9Y696 AC015656.1-201ENST00000624209 3578 ntBASIC17.43■□□□□ 0.38
CLIC4Q9Y696 AC067930.6-201ENST00000623257 4947 ntBASIC17.43■□□□□ 0.38
CLIC4Q9Y696 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 AL138799.1-201ENST00000448213 1675 ntBASIC17.42■□□□□ 0.38
CLIC4Q9Y696 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 AL137783.1-201ENST00000623494 1896 ntBASIC17.42■□□□□ 0.38
CLIC4Q9Y696 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 TPRX2P-201ENST00000535362 881 ntBASIC17.42■□□□□ 0.38
CLIC4Q9Y696 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 AC036164.1-201ENST00000570544 333 ntBASIC17.42■□□□□ 0.38
CLIC4Q9Y696 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.42■□□□□ 0.38
CLIC4Q9Y696 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms