Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TSSC4Q9Y5U2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TSSC4Q9Y5U2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TSSC4Q9Y5U2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TSSC4Q9Y5U2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.07□□□□□ -0.48
TSSC4Q9Y5U2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TSSC4Q9Y5U2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.07□□□□□ -0.48
TSSC4Q9Y5U2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TSSC4Q9Y5U2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 AC016694.1-201ENST00000434179 700 ntBASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 AC007551.1-201ENST00000457394 519 ntBASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 AC093433.1-201ENST00000458048 571 ntBASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 AC119751.2-201ENST00000504529 210 ntBASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 KRT18P25-201ENST00000508931 1278 ntBASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 MIR4259-201ENST00000584466 101 ntBASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 AC107373.2-201ENST00000607735 490 ntBASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 AC005252.2-201ENST00000624630 1141 ntBASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TSSC4Q9Y5U2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 FAM21FP-201ENST00000426241 1131 ntBASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 RPL7P3-201ENST00000441388 714 ntBASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 FO681548.1-201ENST00000455617 1132 ntBASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.05□□□□□ -0.48
TSSC4Q9Y5U2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms